Difference between revisions of "RNA-DIRECTED-RNA-POLYMERASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-DIRECTED-RNA-POLYMERASE-RXN RNA-DIRECTED-RNA-POLYMERASE-RXN] == * direction: ** REVERSIBLE * co...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.7.7.48 EC-2.7.7.48] | ** [http://enzyme.expasy.org/EC/2.7.7.48 EC-2.7.7.48] | ||
+ | * common name: | ||
+ | ** RNA-directed 5'-3' RNA polymerase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[RNA-Holder]][c] '''+''' 1 [[Nucleoside-Triphosphates]][c] '''<=>''' 1 [[RNA-Holder]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 a | + | ** 1 a ribonucleic acid[c] '''+''' 1 a nucleoside triphosphate[c] '''<=>''' 1 a ribonucleic acid[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[SJ15156]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
− | * Gene: [[ | + | * Gene: [[SJ03546]] |
− | + | ||
− | + | ||
− | + | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
Line 33: | Line 30: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[SJ20866]] | ||
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: GO-TERM | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
Line 239: | Line 239: | ||
** [http://www.uniprot.org/uniprot/P31332 P31332] | ** [http://www.uniprot.org/uniprot/P31332 P31332] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
− | |||
{{#set: ec number=EC-2.7.7.48}} | {{#set: ec number=EC-2.7.7.48}} | ||
− | {{#set: gene associated= | + | {{#set: common name=RNA-directed 5'-3' RNA polymerase}} |
+ | {{#set: gene associated=SJ15156|SJ03546|SJ06734|SJ15148|SJ20866}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 11:27, 10 January 2019
Contents
Reaction RNA-DIRECTED-RNA-POLYMERASE-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- RNA-directed 5'-3' RNA polymerase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 RNA-Holder[c] + 1 Nucleoside-Triphosphates[c] <=> 1 RNA-Holder[c] + 1 PPI[c]
- With common name(s):
- 1 a ribonucleic acid[c] + 1 a nucleoside triphosphate[c] <=> 1 a ribonucleic acid[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ15156
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03546
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06734
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ15148
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ20866
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
- UNIPROT:
- P08545
- P12723
- Q83496
- P16342
- P26627
- Q04561
- Q07048
- Q7M006
- Q66339
- P27408
- P25328
- P30929
- Q02119
- P18457
- P36309
- Q03495
- P36312
- P27738
- P24658
- P16379
- P15402
- P36290
- P22956
- P12577
- Q82451
- P31345
- Q02382
- Q67726
- Q9IFX2
- P35975
- P04517
- P03300
- P22055
- P06209
- P23069
- P06210
- P21404
- P08291
- P03313
- Q86530
- P12915
- P03304
- P32537
- P17593
- P29813
- P17594
- P04936
- P08617
- P06441
- P16604
- P29152
- P29149
- P18522
- P03600
- Q83328
- Q9PYF1
- P36304
- P37987
- P22168
- Q03396
- Q04574
- P35928
- P33453
- P35930
- Q90069
- Q9IBP2
- Q04575
- P35341
- Q02941
- Q01206
- Q03053
- Q86632
- Q86656
- Q8QY00
- Q8QY01
- Q99A77
- Q7LZX1
- P29324
- P03430
- P03431
- P19703
- P03432
- P13871
- P07832
- P13872
- P27153
- P13878
- P03434
- P13873
- P11136
- P13874
- P27194
- P12445
- P13877
- P03429
- P18884
- P13875
- P13876
- P17965
- Q80873
- Q89335
- Q67293
- Q67303
- Q7M023
- P07393
- P00585
- P14647
- P21405
- P19751
- P31352
- P28887
- P11205
- P04518
- P17460
- P15187
- Q9WJD6
- P15962
- P29044
- Q65876
- P29045
- P09507
- P17520
- P11623
- P20470
- P27176
- P28976
- P15095
- P28897
- P20128
- P20127
- P27209
- P22958
- P19811
- P27409
- P27410
- P29154
- P14240
- P20430
- P13840
- P31817
- P12918
- P22173
- P22174
- P05080
- P09675
- Q9JA04
- Q9JA03
- Q84792
- P13025
- P18882
- P12444
- P15965
- Q98595
- Q85257
- P09674
- Q9MBL0
- P27314
- P27316
- Q84851
- Q85115
- Q04158
- Q89234
- P37800
- Q05912
- P49303
- P35262
- P41357
- Q66101
- Q67433
- Q83097
- Q83074
- Q66292
- Q66220
- P31999
- Q90153
- P23172
- O89163
- O82504
- O37086
- O89344
- P27407
- O14227
- Q9ZR58
- P27920
- P17779
- P12576
- P06829
- P06447
- P03523
- P13615
- P11213
- P16289
- P31332