Difference between revisions of "RXN1F-168"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CPD-10332]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-96]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 gibberellin44 (open lactone form)[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 H2O[c] '''+''' 1 gibberellin A19[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ07557]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ14670]] | * Gene: [[SJ14670]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| Line 21: | Line 24: | ||
* Gene: [[SJ14675]] | * Gene: [[SJ14675]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ14672]] |
| − | + | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ08018]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
== Pathways == | == Pathways == | ||
* [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035] | * [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035] | ||
| Line 41: | Line 41: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16034 16034] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07184 R07184] | ** [http://www.genome.jp/dbget-bin/www_bget?R07184 R07184] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: ec number=EC-1.14.11.12}} | {{#set: ec number=EC-1.14.11.12}} | ||
| − | {{#set: gene associated=SJ14670|SJ14677|SJ14675| | + | {{#set: gene associated=SJ07557|SJ14670|SJ14677|SJ14675|SJ14672|SJ08018}} |
{{#set: in pathway=PWY-5035}} | {{#set: in pathway=PWY-5035}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 11:31, 10 January 2019
Contents
Reaction RXN1F-168
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-10332[c] + 1 2-KETOGLUTARATE[c] + 1 OXYGEN-MOLECULE[c] => 1 SUC[c] + 1 CARBON-DIOXIDE[c] + 1 WATER[c] + 1 CPD1F-96[c]
- With common name(s):
- 1 gibberellin44 (open lactone form)[c] + 1 2-oxoglutarate[c] + 1 oxygen[c] => 1 succinate[c] + 1 CO2[c] + 1 H2O[c] + 1 gibberellin A19[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ07557
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ14670
- Source: orthology-arabidopsis_thaliana
- Gene: SJ14677
- Source: orthology-arabidopsis_thaliana
- Gene: SJ14675
- Source: orthology-arabidopsis_thaliana
- Gene: SJ14672
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ08018
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-5035, gibberellin biosynthesis III (early C-13 hydroxylation): PWY-5035
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
External links
