Difference between revisions of "HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == * direction: ** R...") |
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* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10] | ** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10] | ||
+ | * common name: | ||
+ | ** hydroxymethyl glutaryl-CoA synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 acetoacetyl-CoA[c] '''+''' 1 H2O[c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Line 24: | Line 24: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-arabidopsis_thaliana]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | |||
== Pathways == | == Pathways == | ||
− | |||
− | |||
− | |||
− | |||
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922] | * [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922] | ||
** '''7''' reactions found over '''7''' reactions in the full pathway | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] |
− | ** ''' | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
− | * [[ | + | * [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367] |
− | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524] | * [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524] | ||
** '''5''' reactions found over '''8''' reactions in the full pathway | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] | ||
+ | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
Line 50: | Line 50: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10191 10191] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978] | ** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978] | ||
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** [http://www.uniprot.org/uniprot/P93773 P93773] | ** [http://www.uniprot.org/uniprot/P93773 P93773] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
− | |||
{{#set: ec number=EC-2.3.3.10}} | {{#set: ec number=EC-2.3.3.10}} | ||
+ | {{#set: common name=hydroxymethyl glutaryl-CoA synthase}} | ||
{{#set: gene associated=SJ11593|SJ06617}} | {{#set: gene associated=SJ11593|SJ06617}} | ||
− | {{#set: in pathway= | + | {{#set: in pathway=PWY-922|PWY-6174|PWY66-367|PWY-7524|PWY-7571|PWY-7391}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction source=orthology-arabidopsis_thaliana | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 12:42, 10 January 2019
Contents
Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- hydroxymethyl glutaryl-CoA synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ACETOACETYL-COA[c] + 1 WATER[c] + 1 ACETYL-COA[c] <=> 1 PROTON[c] + 1 CO-A[c] + 1 3-HYDROXY-3-METHYL-GLUTARYL-COA[c]
- With common name(s):
- 1 acetoacetyl-CoA[c] + 1 H2O[c] + 1 acetyl-CoA[c] <=> 1 H+[c] + 1 coenzyme A[c] + 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ11593
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06617
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-922, mevalonate pathway I: PWY-922
- 7 reactions found over 7 reactions in the full pathway
- PWY-6174, mevalonate pathway II (archaea): PWY-6174
- 6 reactions found over 7 reactions in the full pathway
- PWY66-367, ketogenesis: PWY66-367
- 4 reactions found over 5 reactions in the full pathway
- PWY-7524, mevalonate pathway III (archaea): PWY-7524
- 5 reactions found over 8 reactions in the full pathway
- PWY-7571, ferrichrome A biosynthesis: PWY-7571
- 1 reactions found over 5 reactions in the full pathway
- PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
- 7 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: