Difference between revisions of "LCYSDESULF-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LCYSDESULF-RXN LCYSDESULF-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cystathionine gam...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1] | ** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1] | ||
** [http://enzyme.expasy.org/EC/4.4.1.28 EC-4.4.1.28] | ** [http://enzyme.expasy.org/EC/4.4.1.28 EC-4.4.1.28] | ||
| + | * common name: | ||
| + | ** cystathionine gamma-lyase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[HS]][c] '''+''' 1 [[AMMONIUM]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 L-cysteine[c] '''+''' 1 H2O[c] '''=>''' 1 pyruvate[c] '''+''' 1 hydrogen sulfide[c] '''+''' 1 ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ05358]] | * Gene: [[SJ05358]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 28: | Line 25: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ05357]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: GO-TERM | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY66-426]], hydrogen sulfide biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-426 PWY66-426] | ||
| + | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 38: | Line 40: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24932 24932] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00782 R00782] | ** [http://www.genome.jp/dbget-bin/www_bget?R00782 R00782] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-4.4.1.1}} | {{#set: ec number=EC-4.4.1.1}} | ||
{{#set: ec number=EC-4.4.1.28}} | {{#set: ec number=EC-4.4.1.28}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=cystathionine gamma-lyase}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=SJ05358|SJ20026|SJ05357}} |
| + | {{#set: in pathway=PWY66-426}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 12:34, 10 January 2019
Contents
Reaction LCYSDESULF-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- cystathionine gamma-lyase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 L-cysteine[c] + 1 H2O[c] => 1 pyruvate[c] + 1 hydrogen sulfide[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ05358
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ20026
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05357
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY66-426, hydrogen sulfide biosynthesis II (mammalian): PWY66-426
- 2 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
