Difference between revisions of "CPD0-1108"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLGLUTKIN-RXN ACETYLGLUTKIN-RXN] == * direction: ** REVERSIBLE * common name: ** acetylglutamat...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1108 CPD0-1108] == * smiles: ** C(C1(C(O)C(O)C(O)O1))O * common name: ** β-D-ribofura...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLGLUTKIN-RXN ACETYLGLUTKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1108 CPD0-1108] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(C1(C(O)C(O)C(O)O1))O
 
* common name:
 
* common name:
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** acetylglutamate kinase
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** β-D-ribofuranose
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.7.2.8 EC-2.7.2.8]
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** InChIKey=HMFHBZSHGGEWLO-TXICZTDVSA-N
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* molecular weight:
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** 150.131   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[ACETYL-GLU]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[N-ACETYL-GLUTAMYL-P]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-14904]]
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** 1 ATP[c] '''+''' 1 N-acetyl-L-glutamate[c] '''<=>''' 1 ADP[c] '''+''' 1 N-acetylglutamyl-phosphate[c]
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* [[RXN-4315-CPD-4207/WATER//CPD0-1108/CPD-4209.35.]]
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* [[RXN0-5305]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[SJ09366]]
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** Source: [[annotation-saccharina_japonica_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-saccharina_japonica_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-CPD:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14629 14629]
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** [http://www.genome.jp/dbget-bin/www_bget?C16639 C16639]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R02649 R02649]
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** [http://www.chemspider.com/Chemical-Structure.394477.html 394477]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P54898 P54898]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=47002 47002]
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** [http://www.uniprot.org/uniprot/Q9PIR8 Q9PIR8]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q60382 Q60382]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=447347 447347]
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** [http://www.uniprot.org/uniprot/Q9JUK2 Q9JUK2]
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{{#set: smiles=C(C1(C(O)C(O)C(O)O1))O}}
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** [http://www.uniprot.org/uniprot/Q9CHD2 Q9CHD2]
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{{#set: common name=&beta;-D-ribofuranose}}
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** [http://www.uniprot.org/uniprot/Q07905 Q07905]
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{{#set: inchi key=InChIKey=HMFHBZSHGGEWLO-TXICZTDVSA-N}}
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** [http://www.uniprot.org/uniprot/P0A6C8 P0A6C8]
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{{#set: molecular weight=150.131    }}
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** [http://www.uniprot.org/uniprot/Q01217 Q01217]
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{{#set: reversible reaction associated=RXN-14904|RXN-4315-CPD-4207/WATER//CPD0-1108/CPD-4209.35.|RXN0-5305}}
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** [http://www.uniprot.org/uniprot/P31318 P31318]
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** [http://www.uniprot.org/uniprot/P69366 P69366]
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** [http://www.uniprot.org/uniprot/P69365 P69365]
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** [http://www.uniprot.org/uniprot/P73326 P73326]
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** [http://www.uniprot.org/uniprot/O50147 O50147]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=acetylglutamate kinase}}
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{{#set: ec number=EC-2.7.2.8}}
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{{#set: gene associated=SJ09366}}
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{{#set: in pathway=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 08:46, 18 May 2018

Metabolite CPD0-1108

  • smiles:
    • C(C1(C(O)C(O)C(O)O1))O
  • common name:
    • β-D-ribofuranose
  • inchi key:
    • InChIKey=HMFHBZSHGGEWLO-TXICZTDVSA-N
  • molecular weight:
    • 150.131
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links



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