Difference between revisions of "RXN0-5144"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5144 RXN0-5144] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[tRNA-Containing-5AminoMe-2-ThioUrdines]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[tRNA-Containing-5MeAminoMe-2-ThioU]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 S-adenosyl-L-methionine[c] '''+''' 1 a 5-aminomethyl-2-thiouridine34 in tRNA[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a 5-methylaminomethyl-2-thiouridine34 in tRNA[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 18: | Line 18: | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-7892]], tRNA-uridine 2-thiolation (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7892 PWY-7892] | ||
| + | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 23: | Line 25: | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19570 19570] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00601 R00601] | ** [http://www.genome.jp/dbget-bin/www_bget?R00601 R00601] | ||
| Line 30: | Line 34: | ||
{{#set: ec number=EC-2.1.1.61}} | {{#set: ec number=EC-2.1.1.61}} | ||
{{#set: gene associated=SJ13939}} | {{#set: gene associated=SJ13939}} | ||
| − | {{#set: in pathway=}} | + | {{#set: in pathway=PWY-7892}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 13:42, 10 January 2019
Contents
Reaction RXN0-5144
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINE[c] + 1 tRNA-Containing-5AminoMe-2-ThioUrdines[c] => 1 ADENOSYL-HOMO-CYS[c] + 1 tRNA-Containing-5MeAminoMe-2-ThioU[c] + 1 PROTON[c]
- With common name(s):
- 1 S-adenosyl-L-methionine[c] + 1 a 5-aminomethyl-2-thiouridine34 in tRNA[c] => 1 S-adenosyl-L-homocysteine[c] + 1 a 5-methylaminomethyl-2-thiouridine34 in tRNA[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13939
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-7892, tRNA-uridine 2-thiolation (bacteria): PWY-7892
- 3 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
External links
