Difference between revisions of "SAICARSYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAICARSYN-RXN SAICARSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylamino...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/6.3.2.6 EC-6.3.2.6] | ** [http://enzyme.expasy.org/EC/6.3.2.6 EC-6.3.2.6] | ||
+ | * common name: | ||
+ | ** phosphoribosylaminoimidazole-succinocarboxamide synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ATP]][c] '''+''' 1 [[ | + | ** 1 [[ATP]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 ATP | + | ** 1 ATP[c] '''+''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] '''+''' 1 L-aspartate[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Line 22: | Line 22: | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124] | * [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124] | ||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123] | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234] | * [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234] | ||
** '''3''' reactions found over '''6''' reactions in the full pathway | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
Line 54: | Line 54: | ||
** [http://www.uniprot.org/uniprot/Q9R7D5 Q9R7D5] | ** [http://www.uniprot.org/uniprot/Q9R7D5 Q9R7D5] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
{{#set: ec number=EC-6.3.2.6}} | {{#set: ec number=EC-6.3.2.6}} | ||
+ | {{#set: common name=phosphoribosylaminoimidazole-succinocarboxamide synthase}} | ||
{{#set: gene associated=SJ13173}} | {{#set: gene associated=SJ13173}} | ||
− | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-6124|PWY-6123|PWY-7234}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 12:55, 10 January 2019
Contents
Reaction SAICARSYN-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- phosphoribosylaminoimidazole-succinocarboxamide synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ATP[c] + 1 PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE[c] + 1 L-ASPARTATE[c] => 1 PROTON[c] + 1 ADP[c] + 1 Pi[c] + 1 P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE[c]
- With common name(s):
- 1 ATP[c] + 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] + 1 L-aspartate[c] => 1 H+[c] + 1 ADP[c] + 1 phosphate[c] + 1 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13173
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
- 5 reactions found over 5 reactions in the full pathway
- PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
- 4 reactions found over 6 reactions in the full pathway
- PWY-7234, inosine-5'-phosphate biosynthesis III: PWY-7234
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: