Difference between revisions of "ARGDECARBOX-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGDECARBOX-RXN ARGDECARBOX-RXN] == * direction: ** REVERSIBLE * common name: ** arginine decarboxy...") |
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* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.1.1.19 EC-4.1.1.19] | ** [http://enzyme.expasy.org/EC/4.1.1.19 EC-4.1.1.19] | ||
| + | * common name: | ||
| + | ** arginine decarboxylase, biosynthetic | ||
* Synonym(s): | * Synonym(s): | ||
| Line 21: | Line 21: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY0-1299]], arginine dependent acid resistance: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1299 PWY0-1299] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
* [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-III-PWY ARGDEG-III-PWY] | * [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-III-PWY ARGDEG-III-PWY] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
* [[PWY0-823]], L-arginine degradation III (arginine decarboxylase/agmatinase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-823 PWY0-823] | * [[PWY0-823]], L-arginine degradation III (arginine decarboxylase/agmatinase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-823 PWY0-823] | ||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| − | |||
| − | |||
| − | |||
| − | |||
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305] | * [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305] | ||
** '''4''' reactions found over '''4''' reactions in the full pathway | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY-40]], putrescine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-40 PWY-40] | * [[PWY-40]], putrescine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-40 PWY-40] | ||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| − | * [[ | + | * [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834] |
| − | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| + | * [[PWY-43]], putrescine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-43 PWY-43] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 41: | Line 41: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17644 17644] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00566 R00566] | ** [http://www.genome.jp/dbget-bin/www_bget?R00566 R00566] | ||
| Line 64: | Line 64: | ||
** [http://www.uniprot.org/uniprot/O64453 O64453] | ** [http://www.uniprot.org/uniprot/O64453 O64453] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
{{#set: ec number=EC-4.1.1.19}} | {{#set: ec number=EC-4.1.1.19}} | ||
| + | {{#set: common name=arginine decarboxylase, biosynthetic}} | ||
{{#set: gene associated=SJ12405}} | {{#set: gene associated=SJ12405}} | ||
| − | {{#set: in pathway=ARGDEG-III-PWY|PWY0-823|PWY- | + | {{#set: in pathway=PWY0-1299|ARGDEG-III-PWY|PWY0-823|PWY-6305|PWY-40|PWY-6834|PWY-43}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 13:03, 10 January 2019
Contents
Reaction ARGDECARBOX-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- arginine decarboxylase, biosynthetic
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 ARG[c] <=> 1 CARBON-DIOXIDE[c] + 1 AGMATHINE[c]
- With common name(s):
- 1 H+[c] + 1 L-arginine[c] <=> 1 CO2[c] + 1 agmatine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ12405
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY0-1299, arginine dependent acid resistance: PWY0-1299
- 1 reactions found over 1 reactions in the full pathway
- ARGDEG-III-PWY, L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): ARGDEG-III-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY0-823, L-arginine degradation III (arginine decarboxylase/agmatinase pathway): PWY0-823
- 2 reactions found over 2 reactions in the full pathway
- PWY-6305, putrescine biosynthesis IV: PWY-6305
- 4 reactions found over 4 reactions in the full pathway
- PWY-40, putrescine biosynthesis I: PWY-40
- 2 reactions found over 2 reactions in the full pathway
- PWY-6834, spermidine biosynthesis III: PWY-6834
- 2 reactions found over 4 reactions in the full pathway
- PWY-43, putrescine biosynthesis II: PWY-43
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
