Difference between revisions of "DIHYDRODIPICSYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydro...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7] | ** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7] | ||
| + | * common name: | ||
| + | ** 4-hydroxy-tetrahydrodipicolinate synthase | ||
* Synonym(s): | * Synonym(s): | ||
** dihydropicolinate synthetase | ** dihydropicolinate synthetase | ||
| Line 13: | Line 13: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[PYRUVATE]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[ | + | ** 1 [[PYRUVATE]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 pyruvate[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 | + | ** 1 pyruvate[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ18863]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ21231]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 28: | Line 28: | ||
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] | * [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] | ||
** '''7''' reactions found over '''7''' reactions in the full pathway | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941] |
| − | ** ''' | + | ** '''6''' reactions found over '''9''' reactions in the full pathway |
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY] | * [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY] | ||
** '''7''' reactions found over '''9''' reactions in the full pathway | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942] |
| − | ** '''6''' reactions found over ''' | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 71: | Line 71: | ||
** [http://www.uniprot.org/uniprot/P24846 P24846] | ** [http://www.uniprot.org/uniprot/P24846 P24846] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-4.3.3.7}} | {{#set: ec number=EC-4.3.3.7}} | ||
| + | {{#set: common name=4-hydroxy-tetrahydrodipicolinate synthase}} | ||
{{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}} | {{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=SJ18863|SJ21231}} |
| − | {{#set: in pathway=PWY-5097|PWY- | + | {{#set: in pathway=PWY-5097|PWY-2941|DAPLYSINESYN-PWY|PWY-2942}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 10:48, 10 January 2019
Contents
Reaction DIHYDRODIPICSYN-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 4-hydroxy-tetrahydrodipicolinate synthase
- Synonym(s):
- dihydropicolinate synthetase
- dihydrodipicolinic acid synthase
Reaction Formula
- With identifiers:
- 1 PYRUVATE[c] + 1 L-ASPARTATE-SEMIALDEHYDE[c] => 1 CPD-14443[c] + 1 WATER[c] + 1 PROTON[c]
- With common name(s):
- 1 pyruvate[c] + 1 L-aspartate-semialdehyde[c] => 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] + 1 H2O[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ18863
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ21231
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-5097, L-lysine biosynthesis VI: PWY-5097
- 7 reactions found over 7 reactions in the full pathway
- PWY-2941, L-lysine biosynthesis II: PWY-2941
- 6 reactions found over 9 reactions in the full pathway
- DAPLYSINESYN-PWY, L-lysine biosynthesis I: DAPLYSINESYN-PWY
- 7 reactions found over 9 reactions in the full pathway
- PWY-2942, L-lysine biosynthesis III: PWY-2942
- 6 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
- UNIPROT:
