Difference between revisions of "2.1.1.113-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.113-RXN 2.1.1.113-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** site-specific DNA-m...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** site-specific DNA-methyltransferase (cytosine-N4-specific)
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.1.1.113 EC-2.1.1.113]
 
** [http://enzyme.expasy.org/EC/2.1.1.113 EC-2.1.1.113]
 +
* common name:
 +
** site-specific DNA-methyltransferase (cytosine-N4-specific)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DNA-Cytosines]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DNA-N4-Methylcytosine]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DNA-Cytosines]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-N4-Methylcytosine]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytosine in DNA[c] '''=>''' 1 H+[c] '''+''' 1 an N4-methylcytosine in DNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytosine in DNA[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an N4-methylcytosine in DNA[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[SJ01551]]
 
* Gene: [[SJ01551]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ10173]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ09110]]
 
* Gene: [[SJ09110]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ10173]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
Line 39: Line 39:
 
** [http://www.uniprot.org/uniprot/Q04845 Q04845]
 
** [http://www.uniprot.org/uniprot/Q04845 Q04845]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=site-specific DNA-methyltransferase (cytosine-N4-specific)}}
 
 
{{#set: ec number=EC-2.1.1.113}}
 
{{#set: ec number=EC-2.1.1.113}}
−
{{#set: gene associated=SJ01551|SJ09110|SJ10173}}
+
{{#set: common name=site-specific DNA-methyltransferase (cytosine-N4-specific)}}
 +
{{#set: gene associated=SJ01551|SJ10173|SJ09110}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:22, 10 January 2019

Reaction 2.1.1.113-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • site-specific DNA-methyltransferase (cytosine-N4-specific)
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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