Difference between revisions of "RXN-9235"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9235 RXN-9235] == * direction: ** LEFT-TO-RIGHT * common name: ** ubiquinone biosynthesis methy...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** ubiquinone biosynthesis methyltransferase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.1.1.201 EC-2.1.1.201]
 
** [http://enzyme.expasy.org/EC/2.1.1.201 EC-2.1.1.201]
 +
* common name:
 +
** ubiquinone biosynthesis methyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-9869]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-9871]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-9869]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9871]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-methoxy-6-all trans-decaprenyl-2-methoxy-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ02693]]
+
* Gene: [[SJ02842]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ20751]]
+
* Gene: [[SJ07072]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ02842]]
+
* Gene: [[SJ00609]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ11757]]
+
* Gene: [[SJ11297]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ11297]]
+
* Gene: [[SJ11757]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ07072]]
+
* Gene: [[SJ02693]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ00609]]
+
* Gene: [[SJ20751]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5872]], ubiquinol-10 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5872 PWY-5872]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
* [[PWY-5857]], ubiquinol-10 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5857 PWY-5857]
 
* [[PWY-5857]], ubiquinol-10 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5857 PWY-5857]
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5872]], ubiquinol-10 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5872 PWY-5872]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 48: Line 48:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44765 44765]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ubiquinone biosynthesis methyltransferase}}
 
 
{{#set: ec number=EC-2.1.1.201}}
 
{{#set: ec number=EC-2.1.1.201}}
−
{{#set: gene associated=SJ02693|SJ20751|SJ02842|SJ11757|SJ11297|SJ07072|SJ00609}}
+
{{#set: common name=ubiquinone biosynthesis methyltransferase}}
−
{{#set: in pathway=PWY-5872|PWY-5857}}
+
{{#set: gene associated=SJ02842|SJ07072|SJ00609|SJ11297|SJ11757|SJ02693|SJ20751}}
 +
{{#set: in pathway=PWY-5857|PWY-5872}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 13:28, 10 January 2019

Reaction RXN-9235

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • ubiquinone biosynthesis methyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 S-adenosyl-L-methionine[c] + 1 all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol[c] => 1 H+[c] + 1 S-adenosyl-L-homocysteine[c] + 1 6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5857, ubiquinol-10 biosynthesis (prokaryotic): PWY-5857
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872, ubiquinol-10 biosynthesis (eukaryotic): PWY-5872
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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