Difference between revisions of "DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN] == * direction: ** LEF...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.1.1.37 EC-2.1.1.37]
 
* common name:
 
* common name:
 
** DNA (cytosine-5-)-methyltransferase
 
** DNA (cytosine-5-)-methyltransferase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/2.1.1.37 EC-2.1.1.37]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DNA-Cytosines]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[5-Methylcytosine-DNA]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DNA-Cytosines]][c] '''=>''' 1 [[5-Methylcytosine-DNA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytosine in DNA[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a 5-methylcytosine in DNA[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytosine in DNA[c] '''=>''' 1 a 5-methylcytosine in DNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ02225]]
+
* Gene: [[SJ09533]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00150]]
+
* Gene: [[SJ00246]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ02225]]
−
** Source: [[orthology-arabidopsis_thaliana]]
+
−
* Gene: [[SJ00246]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ22261]]
+
* Gene: [[SJ11154]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03795]]
+
* Gene: [[SJ03848]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11154]]
+
* Gene: [[SJ03795]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ09533]]
+
* Gene: [[SJ22261]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03848]]
+
* Gene: [[SJ00150]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 54: Line 54:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13682 13682]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00380 R00380]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00380 R00380]
Line 131: Line 133:
 
** [http://www.uniprot.org/uniprot/O48867 O48867]
 
** [http://www.uniprot.org/uniprot/O48867 O48867]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=DNA (cytosine-5-)-methyltransferase}}
 
 
{{#set: ec number=EC-2.1.1.37}}
 
{{#set: ec number=EC-2.1.1.37}}
−
{{#set: gene associated=SJ02225|SJ00150|SJ00246|SJ22261|SJ03795|SJ11154|SJ09533|SJ03848}}
+
{{#set: common name=DNA (cytosine-5-)-methyltransferase}}
 +
{{#set: gene associated=SJ09533|SJ00246|SJ02225|SJ11154|SJ03848|SJ03795|SJ22261|SJ00150}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:30, 10 January 2019

Reaction DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • DNA (cytosine-5-)-methyltransferase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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