Difference between revisions of "SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN] == * direction: ** L...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** succinate:quinone oxidoreductase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
 
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
 +
* common name:
 +
** succinate:quinone oxidoreductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUC]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[Ubiquinols]][c]
+
** 1 [[Ubiquinones]][c] '''+''' 1 [[SUC]][c] '''=>''' 1 [[Ubiquinols]][c] '''+''' 1 [[FUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 succinate[c] '''+''' 1 a ubiquinone[c] '''=>''' 1 fumarate[c] '''+''' 1 an ubiquinol[c]
+
** 1 a ubiquinone[c] '''+''' 1 succinate[c] '''=>''' 1 an ubiquinol[c] '''+''' 1 fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[SJ18770]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ19480]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ02694]]
 
* Gene: [[SJ02694]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ01012]]
+
* Gene: [[SJ17484]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ02118]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ02118]]
+
* Gene: [[SJ01012]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ19480]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ17484]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ18770]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-3781]], aerobic respiration I (cytochrome c): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3781 PWY-3781]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1329]], succinate to cytochrome bo oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1329 PWY0-1329]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
* [[PWY0-1353]], succinate to cytochrome bd oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1353 PWY0-1353]
 
* [[PWY0-1353]], succinate to cytochrome bd oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1353 PWY0-1353]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1329]], succinate to cytochrome bo oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1329 PWY0-1329]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3781]], aerobic respiration I (cytochrome c): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3781 PWY-3781]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
 
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13713 13713]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13714 13714]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02164 R02164]
 
** [http://www.genome.jp/dbget-bin/www_bget?R02164 R02164]
Line 122: Line 122:
 
** [http://www.uniprot.org/uniprot/Q9UTJ7 Q9UTJ7]
 
** [http://www.uniprot.org/uniprot/Q9UTJ7 Q9UTJ7]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=succinate:quinone oxidoreductase}}
 
 
{{#set: ec number=EC-1.3.5.1}}
 
{{#set: ec number=EC-1.3.5.1}}
−
{{#set: gene associated=SJ02694|SJ01012|SJ02118|SJ19480|SJ17484|SJ18770}}
+
{{#set: common name=succinate:quinone oxidoreductase}}
−
{{#set: in pathway=PWY-4302|PWY-3781|PWY-7279|PWY0-1329|PWY0-1353|PWY66-398}}
+
{{#set: gene associated=SJ18770|SJ19480|SJ02694|SJ17484|SJ02118|SJ01012}}
 +
{{#set: in pathway=PWY0-1353|PWY0-1329|PWY-7279|PWY-3781|PWY66-398|PWY-4302}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:34, 10 January 2019

Reaction SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • succinate:quinone oxidoreductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a ubiquinone[c] + 1 succinate[c] => 1 an ubiquinol[c] + 1 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1353, succinate to cytochrome bd oxidase electron transfer: PWY0-1353
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1329, succinate to cytochrome bo oxidase electron transfer: PWY0-1329
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7279, aerobic respiration II (cytochrome c) (yeast): PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-3781, aerobic respiration I (cytochrome c): PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY66-398, TCA cycle III (animals): PWY66-398
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-4302, aerobic respiration III (alternative oxidase pathway): PWY-4302
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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