Difference between revisions of "RXN-7677"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7677 RXN-7677] == * direction: ** LEFT-TO-RIGHT * common name: ** 71-hydroxychlorophyllide a mo...")
 
 
Line 5: Line 5:
 
* common name:
 
* common name:
 
** 71-hydroxychlorophyllide a monooxygenase
 
** 71-hydroxychlorophyllide a monooxygenase
−
** chlorophyllide b reductase
 
 
** chlorophyllide a oxygenase [overall]
 
** chlorophyllide a oxygenase [overall]
 +
** chlorophyllide b reductase
 
* Synonym(s):
 
* Synonym(s):
 
** chlorophyllide a oxygenase
 
** chlorophyllide a oxygenase
Line 14: Line 14:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-7015]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[CPD-7014]][c]
+
** 1 [[CPD-7015]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19759]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 71-hydroxychlorophyllide a[c] '''+''' 1 oxygen[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 2 H2O[c] '''+''' 1 chlorophyllide b[c]
+
** 1 71-hydroxychlorophyllide a[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 71-dihydroxychlorophyllide a[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Line 24: Line 24:
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ08869]]
+
* Gene: [[SJ17313]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ22311]]
−
* Gene: [[SJ22309]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00278]]
+
* Gene: [[SJ22309]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ17313]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 45: Line 40:
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ16078]]
+
* Gene: [[SJ00278]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
−
* Gene: [[SJ22311]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ08869]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ16078]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
 
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 62: Line 62:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22137 22137]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R08204 R08204]
 
** [http://www.genome.jp/dbget-bin/www_bget?R08204 R08204]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: common name=71-hydroxychlorophyllide a monooxygenase}}
 
{{#set: common name=71-hydroxychlorophyllide a monooxygenase}}
−
{{#set: common name=chlorophyllide b reductase}}
 
 
{{#set: common name=chlorophyllide a oxygenase [overall]}}
 
{{#set: common name=chlorophyllide a oxygenase [overall]}}
 +
{{#set: common name=chlorophyllide b reductase}}
 
{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
 
{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
−
{{#set: gene associated=SJ07178|SJ08869|SJ22309|SJ00278|SJ17313|SJ04336|SJ15075|SJ16078|SJ22311}}
+
{{#set: gene associated=SJ07178|SJ17313|SJ22311|SJ22309|SJ04336|SJ15075|SJ00278|SJ08869|SJ16078}}
 
{{#set: in pathway=PWY-5068}}
 
{{#set: in pathway=PWY-5068}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:46, 10 January 2019

Reaction RXN-7677

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 71-hydroxychlorophyllide a monooxygenase
    • chlorophyllide a oxygenase [overall]
    • chlorophyllide b reductase
  • Synonym(s):
    • chlorophyllide a oxygenase
    • chlorophyll-b synthase
    • CAO

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 71-hydroxychlorophyllide a[c] + 1 oxygen[c] + 1 NADPH[c] + 1 H+[c] => 1 71-dihydroxychlorophyllide a[c] + 1 H2O[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5068, chlorophyll cycle: PWY-5068
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links


"chlorophyllide a oxygenase [overall" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-7677&oldid=19637"