Difference between revisions of "RXN-15122"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** threonine deaminase * Synon...") |
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == | ||
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
** threonine deaminase | ** threonine deaminase | ||
| Line 9: | Line 9: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[THR]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[ | + | ** 1 [[THR]][c] '''<=>''' 1 [[CPD-15056]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 L-threonine[c] '''=>''' 1 (2Z)-2-aminobut-2-enoate[c] '''+''' 1 | + | ** 1 L-threonine[c] '''<=>''' 1 (2Z)-2-aminobut-2-enoate[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 24: | Line 24: | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826] | * [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826] | ||
| − | ** ''' | + | ** '''2''' reactions found over '''14''' reactions in the full pathway |
* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437] | * [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437] | ||
| − | ** ''' | + | ** '''1''' reactions found over '''6''' reactions in the full pathway |
| + | * [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY] | ||
| + | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 38: | Line 38: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | {{#set: direction=REVERSIBLE}} |
{{#set: common name=threonine deaminase}} | {{#set: common name=threonine deaminase}} | ||
{{#set: gene associated=SJ08066|SJ10955}} | {{#set: gene associated=SJ08066|SJ10955}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY-5826|PWY-5437|ILEUSYN-PWY}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 14:48, 10 January 2019
Contents
Reaction RXN-15122
- direction:
- REVERSIBLE
- common name:
- threonine deaminase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 L-threonine[c] <=> 1 (2Z)-2-aminobut-2-enoate[c] + 1 H2O[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ08066
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10955
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-5826, hypoglycin biosynthesis: PWY-5826
- 2 reactions found over 14 reactions in the full pathway
- PWY-5437, L-threonine degradation I: PWY-5437
- 1 reactions found over 6 reactions in the full pathway
- ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
