Difference between revisions of "RXN-9952"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9952 RXN-9952] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphogluconate dehydrogenas...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.44 EC-1.1.1.44]
 
* common name:
 
* common name:
 
** phosphogluconate dehydrogenase (decarboxylating)
 
** phosphogluconate dehydrogenase (decarboxylating)
 
** 6-phosphogluconate dehydrogenase, decarboxylating
 
** 6-phosphogluconate dehydrogenase, decarboxylating
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.44 EC-1.1.1.44]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-2961]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[NADPH]][c]
+
** 1 [[CPD-2961]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADPH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-gluconate 6-phosphate[c] '''+''' 1 NADP+[c] '''=>''' 1 CO2[c] '''+''' 1 D-ribulose 5-phosphate[c] '''+''' 1 NADPH[c]
+
** 1 D-gluconate 6-phosphate[c] '''+''' 1 NADP+[c] '''=>''' 1 D-ribulose 5-phosphate[c] '''+''' 1 CO2[c] '''+''' 1 NADPH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ00878]]
+
* Gene: [[SJ07211]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ14331]]
+
* Gene: [[SJ11815]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06127]]
+
* Gene: [[SJ14331]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ22264]]
 
* Gene: [[SJ22264]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ12698]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 34: Line 36:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ12698]]
+
* Gene: [[SJ15062]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12699]]
+
* Gene: [[SJ00878]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11815]]
+
* Gene: [[SJ12699]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ07211]]
+
* Gene: [[SJ06127]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ16180]]
 
* Gene: [[SJ16180]]
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[SJ15062]]
 
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 64: Line 64:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10117 10117]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01528 R01528]
 
** [http://www.genome.jp/dbget-bin/www_bget?R01528 R01528]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.1.1.44}}
 
{{#set: common name=phosphogluconate dehydrogenase (decarboxylating)}}
 
{{#set: common name=phosphogluconate dehydrogenase (decarboxylating)}}
 
{{#set: common name=6-phosphogluconate dehydrogenase, decarboxylating}}
 
{{#set: common name=6-phosphogluconate dehydrogenase, decarboxylating}}
−
{{#set: ec number=EC-1.1.1.44}}
+
{{#set: gene associated=SJ07211|SJ11815|SJ14331|SJ22264|SJ12698|SJ11912|SJ15062|SJ00878|SJ12699|SJ06127|SJ16180}}
−
{{#set: gene associated=SJ00878|SJ14331|SJ06127|SJ22264|SJ11912|SJ12698|SJ12699|SJ11815|SJ07211|SJ16180|SJ15062}}
+
 
{{#set: in pathway=OXIDATIVEPENT-PWY}}
 
{{#set: in pathway=OXIDATIVEPENT-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:08, 10 January 2019

Reaction RXN-9952

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • phosphogluconate dehydrogenase (decarboxylating)
    • 6-phosphogluconate dehydrogenase, decarboxylating
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-gluconate 6-phosphate[c] + 1 NADP+[c] => 1 D-ribulose 5-phosphate[c] + 1 CO2[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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