Difference between revisions of "ADENYL-KIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adenylate kinase...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** adenylate kinase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.7.4.3 EC-2.7.4.3]
 
** [http://enzyme.expasy.org/EC/2.7.4.3 EC-2.7.4.3]
 +
* common name:
 +
** adenylate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[AMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 2 [[ADP]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[AMP]][c] '''=>''' 2 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 AMP[c] '''+''' 1 ATP[c] '''=>''' 2 ADP[c]
+
** 1 ATP[c] '''+''' 1 AMP[c] '''=>''' 2 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[SJ18341]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ12510]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ13446]]
 
* Gene: [[SJ13446]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ00789]]
+
* Gene: [[SJ01032]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** Assignment: GO-TERM
+
* Gene: [[SJ21099]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ21967]]
 
* Gene: [[SJ21967]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ04502]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ08159]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
* Gene: [[SJ20076]]
 
* Gene: [[SJ20076]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ10682]]
+
* Gene: [[SJ13448]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ15367]]
+
* Gene: [[SJ12499]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-arabidopsis_thaliana]]
+
* Gene: [[SJ04989]]
−
* Gene: [[SJ12510]]
+
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
** Source: [[orthology-arabidopsis_thaliana]]
+
−
* Gene: [[SJ00793]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
−
* Gene: [[SJ13448]]
+
* Gene: [[SJ10682]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ04502]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ14895]]
 
* Gene: [[SJ14895]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 52: Line 58:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ08159]]
+
* Gene: [[SJ00789]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ21099]]
+
* Gene: [[SJ15367]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ01032]]
+
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ04989]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[SJ00793]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
* Gene: [[SJ08980]]
 
* Gene: [[SJ08980]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ18341]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
** Source: [[orthology-arabidopsis_thaliana]]
 
−
* Gene: [[SJ12499]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
Line 76: Line 76:
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 138: Line 138:
 
** [http://www.uniprot.org/uniprot/P72641 P72641]
 
** [http://www.uniprot.org/uniprot/P72641 P72641]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=adenylate kinase}}
 
 
{{#set: ec number=EC-2.7.4.3}}
 
{{#set: ec number=EC-2.7.4.3}}
−
{{#set: gene associated=SJ13446|SJ00789|SJ21967|SJ20076|SJ10682|SJ15367|SJ12510|SJ00793|SJ13448|SJ04502|SJ14895|SJ02240|SJ08159|SJ21099|SJ01032|SJ04989|SJ08980|SJ18341|SJ12499}}
+
{{#set: common name=adenylate kinase}}
 +
{{#set: gene associated=SJ18341|SJ12510|SJ13446|SJ01032|SJ21099|SJ21967|SJ04502|SJ08159|SJ20076|SJ13448|SJ12499|SJ04989|SJ10682|SJ14895|SJ02240|SJ00789|SJ15367|SJ00793|SJ08980}}
 
{{#set: in pathway=PWY-7219}}
 
{{#set: in pathway=PWY-7219}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:28, 10 January 2019

Reaction ADENYL-KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • adenylate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 AMP[c] => 2 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis: PWY-7219
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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