Difference between revisions of "DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] == * direction: ** LEFT-...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.1.1.33 EC-4.1.1.33] | ** [http://enzyme.expasy.org/EC/4.1.1.33 EC-4.1.1.33] | ||
| + | * common name: | ||
| + | ** diphosphomevalonate decarboxylase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[CPD-641]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ | + | ** 1 [[CPD-641]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 (R)-mevalonate diphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 | + | ** 1 (R)-mevalonate diphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 isopentenyl diphosphate[c] '''+''' 1 CO2[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 20: | Line 20: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922] | * [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922] | ||
| Line 38: | Line 38: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23733 23733] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121] | ** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121] | ||
| Line 49: | Line 49: | ||
** [http://www.uniprot.org/uniprot/O23722 O23722] | ** [http://www.uniprot.org/uniprot/O23722 O23722] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-4.1.1.33}} | {{#set: ec number=EC-4.1.1.33}} | ||
| + | {{#set: common name=diphosphomevalonate decarboxylase}} | ||
{{#set: gene associated=SJ05356}} | {{#set: gene associated=SJ05356}} | ||
{{#set: in pathway=PWY-922|PWY-7391}} | {{#set: in pathway=PWY-922|PWY-7391}} | ||
Latest revision as of 14:40, 10 January 2019
Contents
Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- diphosphomevalonate decarboxylase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-641[c] + 1 ATP[c] => 1 DELTA3-ISOPENTENYL-PP[c] + 1 CARBON-DIOXIDE[c] + 1 ADP[c] + 1 Pi[c]
- With common name(s):
- 1 (R)-mevalonate diphosphate[c] + 1 ATP[c] => 1 isopentenyl diphosphate[c] + 1 CO2[c] + 1 ADP[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ05356
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-922, mevalonate pathway I: PWY-922
- 7 reactions found over 7 reactions in the full pathway
- PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
- 7 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
