Difference between revisions of "RXN-9543"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9543 RXN-9543] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-stearoyl-CoA synthase *...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199] | ** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199] | ||
| + | * common name: | ||
| + | ** 3-oxo-stearoyl-CoA synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[MALONYL-COA]][c] '''+''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-10260]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 malonyl-CoA[c] '''+''' 1 palmitoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 3-oxo-stearoyl-CoA[c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ00613]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | ** Source: [[orthology-nannochloropsis_salina]] |
| + | * Gene: [[SJ11672]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ19629]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ06616]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
== Pathways == | == Pathways == | ||
* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972] | * [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972] | ||
| − | ** ''' | + | ** '''4''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 44: | Line 44: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07758 R07758] | ** [http://www.genome.jp/dbget-bin/www_bget?R07758 R07758] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.3.1.199}} | {{#set: ec number=EC-2.3.1.199}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=3-oxo-stearoyl-CoA synthase}} |
| + | {{#set: gene associated=SJ00613|SJ11672|SJ19629|SJ06616}} | ||
{{#set: in pathway=PWY-5972}} | {{#set: in pathway=PWY-5972}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 10:57, 10 January 2019
Contents
Reaction RXN-9543
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 3-oxo-stearoyl-CoA synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 MALONYL-COA[c] + 1 PALMITYL-COA[c] + 1 PROTON[c] => 1 CPD-10260[c] + 1 CARBON-DIOXIDE[c] + 1 CO-A[c]
- With common name(s):
- 1 malonyl-CoA[c] + 1 palmitoyl-CoA[c] + 1 H+[c] => 1 3-oxo-stearoyl-CoA[c] + 1 CO2[c] + 1 coenzyme A[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00613
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ11672
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ19629
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06616
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-5972, stearate biosynthesis I (animals and fungi): PWY-5972
- 4 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
