Difference between revisions of "ORNDECARBOX-RXN"

Revision as of 12:21, 18 May 2018

Reaction ORNDECARBOX-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • ornithine decarboxylase
• ec number:
  • EC-4.1.1.17
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 L-ORNITHINE[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 PUTRESCINE[c]
• With common name(s):
  • 1 L-ornithine[c] + 1 H+[c] => 1 CO2[c] + 1 putrescine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ16944
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ13198
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina

Pathways

• ORNDEG-PWY, superpathway of ornithine degradation: ORNDEG-PWY
  • 1 reactions found over 5 reactions in the full pathway
• PWY-6305, putrescine biosynthesis IV: PWY-6305
  • 4 reactions found over 4 reactions in the full pathway
• PWY-46, putrescine biosynthesis III: PWY-46
  • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 22964
• LIGAND-RXN:
  • R00670
• UNIPROT:
  • P24169
  • P27121
  • P27116
  • P27120
  • P43099
  • Q9X2I6
  • P08432
  • P27118
  • P11926
  • P14019
  • P00860
  • P09057
  • Q9TZZ6
  • P44317
  • O66940
  • P27119
  • P49725
  • P50134
  • P93351
  • P93357
  • O15696
  • Q84527
  • P41931
  • O69865
  • Q9UQW9