Difference between revisions of "2.4.1.225-RXN"

Revision as of 12:24, 18 May 2018

Reaction 2.4.1.225-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • N-acetylglucosaminyl-proteoglycan 4-β-glucuronosyltransferase
• ec number:
  • EC-2.4.1.225
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 UDP-GLUCURONATE[c] + 1 GlcNAc-GlcA-Gal-Gal-Xyl-Protein[c] => 1 PROTON[c] + 1 GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein[c] + 1 UDP[c]
• With common name(s):
  • 1 UDP-α-D-glucuronate[c] + 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] => 1 H+[c] + 1 a [protein]-3-O-(β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] + 1 UDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ14192
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08300
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08295
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ11522
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ01052
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ07780
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08296
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ14184
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER

Pathways

• PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
  • 7 reactions found over 13 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• LIGAND-RXN:
  • R07335