Difference between revisions of "GLYRIBONUCSYN-RXN"

Revision as of 09:10, 18 May 2018

Reaction GLYRIBONUCSYN-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • phosphoribosylamine-glycine ligase
• ec number:
  • EC-6.3.4.13
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ATP[c] + 1 GLY[c] + 1 5-P-BETA-D-RIBOSYL-AMINE[c] => 1 5-PHOSPHO-RIBOSYL-GLYCINEAMIDE[c] + 1 ADP[c] + 1 Pi[c] + 1 PROTON[c]
• With common name(s):
  • 1 ATP[c] + 1 glycine[c] + 1 5-phospho-β-D-ribosylamine[c] => 1 N1-(5-phospho-β-D-ribosyl)glycinamide[c] + 1 ADP[c] + 1 phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ06408
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana

Pathways

• PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
  • 5 reactions found over 5 reactions in the full pathway
• PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
  • 4 reactions found over 5 reactions in the full pathway
• PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
  • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 17453
• LIGAND-RXN:
  • R04144
• UNIPROT:
  • P07244
  • Q58347
  • P12039
  • P21872
  • P15640
  • P00967
  • P16340
  • P22102
  • Q9JWU6
  • P43845
  • Q9PN47
  • Q64737
  • P20772
  • P26977
  • Q59492
  • P74232
  • Q42804
  • P52421