Difference between revisions of "FADSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** FMN adenylyltransferase *...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** FMN adenylyltransferase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.7.7.2 EC-2.7.7.2]
 
** [http://enzyme.expasy.org/EC/2.7.7.2 EC-2.7.7.2]
 +
* common name:
 +
** FMN adenylyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FMN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[FAD]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[FAD]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 FMN[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''=>''' 1 FAD[c] '''+''' 1 diphosphate[c]
+
** 1 H+[c] '''+''' 1 FMN[c] '''+''' 1 ATP[c] '''=>''' 1 FAD[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ00206]]
+
* Gene: [[SJ01107]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ01760]]
+
* Gene: [[SJ07922]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-nannochloropsis_salina]]
+
* Gene: [[SJ00206]]
−
* Gene: [[SJ01107]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-nannochloropsis_salina]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ07922]]
+
* Gene: [[SJ01760]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-nannochloropsis_salina]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
 
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
 
−
** '''5''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17237 17237]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17238 17238]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
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** [http://www.uniprot.org/uniprot/Q59263 Q59263]
 
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=FMN adenylyltransferase}}
 
 
{{#set: ec number=EC-2.7.7.2}}
 
{{#set: ec number=EC-2.7.7.2}}
−
{{#set: gene associated=SJ00206|SJ01760|SJ01107|SJ07922}}
+
{{#set: common name=FMN adenylyltransferase}}
−
{{#set: in pathway=PWY66-366|PWY-6167|PWY-6168|RIBOSYN2-PWY}}
+
{{#set: gene associated=SJ01107|SJ07922|SJ00206|SJ01760}}
 +
{{#set: in pathway=PWY-6168|PWY66-366|RIBOSYN2-PWY|PWY-6167}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 11:35, 10 January 2019

Reaction FADSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • FMN adenylyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 FMN[c] + 1 ATP[c] => 1 FAD[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 7 reactions found over 9 reactions in the full pathway
  • PWY66-366, flavin biosynthesis IV (mammalian): PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167, flavin biosynthesis II (archaea): PWY-6167
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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