Difference between revisions of "LIPOXYGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LIPOXYGENASE-RXN LIPOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** linoleate 13S...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** linoleate 13S-lipoxygenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.13.11.12 EC-1.13.11.12]
 
** [http://enzyme.expasy.org/EC/1.13.11.12 EC-1.13.11.12]
 +
* common name:
 +
** linoleate 13S-lipoxygenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[LINOLEIC_ACID]][c] '''=>''' 1 [[13-HYDROPEROXYOCTADECA-911-DIENOATE]][c]
+
** 1 [[LINOLEIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[13-HYDROPEROXYOCTADECA-911-DIENOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 linoleate[c] '''=>''' 1 (13S)-HPODE[c]
+
** 1 linoleate[c] '''+''' 1 oxygen[c] '''=>''' 1 (13S)-HPODE[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ03316]]
+
* Gene: [[SJ16632]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16633]]
+
* Gene: [[SJ03316]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12567]]
+
* Gene: [[SJ08291]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ08291]]
+
* Gene: [[SJ16633]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16632]]
+
* Gene: [[SJ12567]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
 
* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5409]], divinyl ether biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5409 PWY-5409]
 
* [[PWY-5409]], divinyl ether biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5409 PWY-5409]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
Line 43: Line 43:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22780 22780]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22781 22781]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03626 R03626]
 
** [http://www.genome.jp/dbget-bin/www_bget?R03626 R03626]
Line 97: Line 97:
 
** [http://www.uniprot.org/uniprot/O04919 O04919]
 
** [http://www.uniprot.org/uniprot/O04919 O04919]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=linoleate 13S-lipoxygenase}}
 
 
{{#set: ec number=EC-1.13.11.12}}
 
{{#set: ec number=EC-1.13.11.12}}
−
{{#set: gene associated=SJ03316|SJ16633|SJ12567|SJ08291|SJ16632}}
+
{{#set: common name=linoleate 13S-lipoxygenase}}
 +
{{#set: gene associated=SJ16632|SJ03316|SJ08291|SJ16633|SJ12567}}
 
{{#set: in pathway=PWY-5410|PWY-5409}}
 
{{#set: in pathway=PWY-5410|PWY-5409}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 11:42, 10 January 2019

Reaction LIPOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • linoleate 13S-lipoxygenase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5410, traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: PWY-5410
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5409, divinyl ether biosynthesis II: PWY-5409
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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