Difference between revisions of "BIOTINLIG-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin-[acetyl-CoA-...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/6.3.4.15 EC-6.3.4.15] | ** [http://enzyme.expasy.org/EC/6.3.4.15 EC-6.3.4.15] | ||
| + | * common name: | ||
| + | ** biotin-[acetyl-CoA-carboxylase] ligase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[BCCP-L-lysine]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[BCCP-biotin-L-lysine]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a [biotin carboxyl-carrier protein]-L-lysine[c] '''+''' 1 biotin[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 a [biotin carboxyl-carrier protein]-biotin-N6-L-lysine[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ06657]] |
| − | + | ||
| − | + | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ07132]] | * Gene: [[SJ07132]] | ||
| Line 25: | Line 23: | ||
* Gene: [[SJ19949]] | * Gene: [[SJ19949]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ10816]] |
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264] | * [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264] | ||
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 47: | Line 47: | ||
** [http://www.uniprot.org/uniprot/P72816 P72816] | ** [http://www.uniprot.org/uniprot/P72816 P72816] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-6.3.4.15}} | {{#set: ec number=EC-6.3.4.15}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=biotin-[acetyl-CoA-carboxylase] ligase}} |
| + | {{#set: gene associated=SJ06657|SJ07132|SJ19949|SJ10816}} | ||
{{#set: in pathway=PWY0-1264}} | {{#set: in pathway=PWY0-1264}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 10:44, 10 January 2019
Contents
Reaction BIOTINLIG-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- biotin-[acetyl-CoA-carboxylase] ligase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 BCCP-L-lysine[c] + 1 BIOTIN[c] + 1 ATP[c] => 1 AMP[c] + 1 PPI[c] + 1 BCCP-biotin-L-lysine[c] + 1 PROTON[c]
- With common name(s):
- 1 a [biotin carboxyl-carrier protein]-L-lysine[c] + 1 biotin[c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 a [biotin carboxyl-carrier protein]-biotin-N6-L-lysine[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ06657
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ07132
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ19949
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ10816
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY0-1264, biotin-carboxyl carrier protein assembly: PWY0-1264
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
"biotin-[acetyl-CoA-carboxylase] ligase" cannot be used as a page name in this wiki.
