Difference between revisions of "RXN-13398"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyllide a oxygenase...") |
|||
| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.14.13.122 EC-1.14.13.122] | ** [http://enzyme.expasy.org/EC/1.14.13.122 EC-1.14.13.122] | ||
| + | * common name: | ||
| + | ** chlorophyllide a oxygenase [overall] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7014]][c] '''+''' 3 [[WATER]][c] '''+''' 2 [[NADP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 chlorophyllide a[c] '''+''' 2 oxygen[c] '''+''' 2 NADPH[c] '''+''' 2 H+[c] '''=>''' 1 chlorophyllide b[c] '''+''' 3 H2O[c] '''+''' 2 NADP+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ15075]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ04336]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[SJ22309]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: GO-TERM | ||
| + | * Gene: [[SJ22311]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: GO-TERM | ||
* Gene: [[SJ00278]] | * Gene: [[SJ00278]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 29: | Line 38: | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ17313]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| − | *** Assignment: | + | *** Assignment: GO-TERM |
* Gene: [[SJ16078]] | * Gene: [[SJ16078]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ07178]] |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| Line 62: | Line 62: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R10080 R10080] | ** [http://www.genome.jp/dbget-bin/www_bget?R10080 R10080] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-1.14.13.122}} | {{#set: ec number=EC-1.14.13.122}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=chlorophyllide a oxygenase [overall]}} |
| + | {{#set: gene associated=SJ15075|SJ04336|SJ22309|SJ22311|SJ00278|SJ08869|SJ17313|SJ16078|SJ07178}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 10:46, 10 January 2019
Contents
Reaction RXN-13398
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- chlorophyllide a oxygenase [overall]
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CHLOROPHYLLIDE-A[c] + 2 OXYGEN-MOLECULE[c] + 2 NADPH[c] + 2 PROTON[c] => 1 CPD-7014[c] + 3 WATER[c] + 2 NADP[c]
- With common name(s):
- 1 chlorophyllide a[c] + 2 oxygen[c] + 2 NADPH[c] + 2 H+[c] => 1 chlorophyllide b[c] + 3 H2O[c] + 2 NADP+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ15075
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ04336
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ22309
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ22311
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ00278
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ08869
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ17313
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ16078
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07178
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
"chlorophyllide a oxygenase [overall" cannot be used as a page name in this wiki.
