Difference between revisions of "DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3] | ** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3] | ||
+ | * common name: | ||
+ | ** deoxyribodipyrimidine photolyase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[DNA- | + | ** 1 [[DNA-deoxycytidine-thymidine-dimer]][c] '''+''' 1 [[Light]][c] '''=>''' 1 [[DNA-Cytidines]][c] '''+''' 1 [[DNA-thymidines]][c] |
* With common name(s): | * With common name(s): | ||
− | ** | + | ** 1 a dimer of non-adjacent 2'-deoxycytidine and thymidine in DNA[c] '''+''' 1 hν[c] '''=>''' 1 a 2'-deoxycytidine in DNA[c] '''+''' 1 a thymidine in DNA[c] |
+ | |||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | |||
− | |||
− | |||
* Gene: [[SJ08112]] | * Gene: [[SJ08112]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
Line 27: | Line 25: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[SJ13192]] | ||
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
Line 56: | Line 57: | ||
** [http://www.uniprot.org/uniprot/P00914 P00914] | ** [http://www.uniprot.org/uniprot/P00914 P00914] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
{{#set: ec number=EC-4.1.99.3}} | {{#set: ec number=EC-4.1.99.3}} | ||
− | {{#set: gene associated= | + | {{#set: common name=deoxyribodipyrimidine photolyase}} |
+ | {{#set: gene associated=SJ08112|SJ04101|SJ13192}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 10:50, 10 January 2019
Contents
Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- deoxyribodipyrimidine photolyase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DNA-deoxycytidine-thymidine-dimer[c] + 1 Light[c] => 1 DNA-Cytidines[c] + 1 DNA-thymidines[c]
- With common name(s):
- 1 a dimer of non-adjacent 2'-deoxycytidine and thymidine in DNA[c] + 1 hν[c] => 1 a 2'-deoxycytidine in DNA[c] + 1 a thymidine in DNA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ08112
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ04101
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ13192
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
- UNIPROT: