Difference between revisions of "FORMATETHFLIG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formate-tet...")
 
 
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] ==
 
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** formate-tetrahydrofolate ligase
+
−
** formate:tetrahydropteroylpolyglutamate ligase
+
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/6.3.4.3 EC-6.3.4.3]
 
** [http://enzyme.expasy.org/EC/6.3.4.3 EC-6.3.4.3]
 +
* common name:
 +
** formate:tetrahydropteroylpolyglutamate ligase
 +
** formate-tetrahydrofolate ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[THF-GLU-N]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[THF-GLU-N]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''<=>''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 formate[c] '''+''' 1 a tetrahydrofolate[c] '''=>''' 1 ADP[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 phosphate[c]
+
** 1 a tetrahydrofolate[c] '''+''' 1 ATP[c] '''+''' 1 formate[c] '''<=>''' 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[SJ07523]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
* Gene: [[SJ12991]]
 
* Gene: [[SJ12991]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ07523]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
+
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
 
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
 
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
+
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20221 20221]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20224 20224]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943]
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** [http://www.uniprot.org/uniprot/Q07064 Q07064]
 
** [http://www.uniprot.org/uniprot/Q07064 Q07064]
 
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
 
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=formate-tetrahydrofolate ligase}}
+
−
{{#set: common name=formate:tetrahydropteroylpolyglutamate ligase}}
+
 
{{#set: ec number=EC-6.3.4.3}}
 
{{#set: ec number=EC-6.3.4.3}}
−
{{#set: gene associated=SJ12991|SJ07523}}
+
{{#set: common name=formate:tetrahydropteroylpolyglutamate ligase}}
−
{{#set: in pathway=PWY-2201|PWY-2161|PWY-1722|CODH-PWY|PWY-3841}}
+
{{#set: common name=formate-tetrahydrofolate ligase}}
 +
{{#set: gene associated=SJ07523|SJ12991}}
 +
{{#set: in pathway=PWY-3841|PWY-1722|CODH-PWY|PWY-2201|PWY-2161}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 12:00, 10 January 2019

Reaction FORMATETHFLIG-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • common name:
    • formate:tetrahydropteroylpolyglutamate ligase
    • formate-tetrahydrofolate ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tetrahydrofolate[c] + 1 ATP[c] + 1 formate[c] <=> 1 an N10-formyl-tetrahydrofolate[c] + 1 ADP[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3841, folate transformations II: PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate: PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-2201, folate transformations I: PWY-2201
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-2161, folate polyglutamylation: PWY-2161
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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