Difference between revisions of "RIBOKIN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-RXN RIBOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribokinase * ec number:...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15] | ** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15] | ||
| + | * common name: | ||
| + | ** ribokinase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CPD-10330]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD-15318]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 α-D-ribofuranose[c] '''+''' 1 ATP[c] '''=>''' 1 α-D-ribose 5-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ01736]] | * Gene: [[SJ01736]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
* Gene: [[SJ07367]] | * Gene: [[SJ07367]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ08247]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | * [[RIBOKIN-PWY]], ribose | + | * [[RIBOKIN-PWY]], ribose phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-PWY RIBOKIN-PWY] |
| − | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 40: | Line 40: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13698 13698] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01051 R01051] | ** [http://www.genome.jp/dbget-bin/www_bget?R01051 R01051] | ||
| Line 52: | Line 52: | ||
** [http://www.uniprot.org/uniprot/O93727 O93727] | ** [http://www.uniprot.org/uniprot/O93727 O93727] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.7.1.15}} | {{#set: ec number=EC-2.7.1.15}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=ribokinase}} |
| + | {{#set: gene associated=SJ01736|SJ07367|SJ08247}} | ||
{{#set: in pathway=RIBOKIN-PWY}} | {{#set: in pathway=RIBOKIN-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 12:07, 10 January 2019
Contents
Reaction RIBOKIN-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- ribokinase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 α-D-ribofuranose[c] + 1 ATP[c] => 1 α-D-ribose 5-phosphate[c] + 1 ADP[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ01736
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07367
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ08247
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- RIBOKIN-PWY, ribose phosphorylation: RIBOKIN-PWY
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
