Difference between revisions of "CDPKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** CDP kinase ** nucleoside...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* common name:
 
* common name:
 
** CDP kinase
 
** CDP kinase
 
** nucleoside diphosphate kinase
 
** nucleoside diphosphate kinase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CTP]][c]
+
** 1 [[CDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CTP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 CDP[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 CTP[c]
+
** 1 CDP[c] '''+''' 1 ATP[c] '''=>''' 1 CTP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ21816]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Gene: [[SJ07124]]
 
* Gene: [[SJ07124]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ16893]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Gene: [[SJ21705]]
 
* Gene: [[SJ21705]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ20794]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[SJ08159]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ21967]]
 
* Gene: [[SJ21967]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20076]]
+
* Gene: [[SJ20794]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 51: Line 36:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ16893]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ21816]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ20076]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ08159]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
 
* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
Line 67: Line 67:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25238 25238]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00570 R00570]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00570 R00570]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-2.7.4.6}}
 
{{#set: common name=CDP kinase}}
 
{{#set: common name=CDP kinase}}
 
{{#set: common name=nucleoside diphosphate kinase}}
 
{{#set: common name=nucleoside diphosphate kinase}}
−
{{#set: ec number=EC-2.7.4.6}}
+
{{#set: gene associated=SJ07124|SJ21705|SJ21967|SJ20794|SJ10125|SJ16893|SJ21816|SJ20076|SJ08159}}
−
{{#set: gene associated=SJ21816|SJ07124|SJ16893|SJ21705|SJ20794|SJ08159|SJ21967|SJ20076|SJ10125}}
+
 
{{#set: in pathway=PWY-7205}}
 
{{#set: in pathway=PWY-7205}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 12:07, 10 January 2019

Reaction CDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • CDP kinase
    • nucleoside diphosphate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CDP[c] + 1 ATP[c] => 1 CTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7205, CMP phosphorylation: PWY-7205
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=CDPKIN-RXN&oldid=14601"