Difference between revisions of "PWY-5789"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28889 TAX-2...") |
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| Line 10: | Line 10: | ||
== Reaction(s) found == | == Reaction(s) found == | ||
| − | ''' | + | '''8''' reactions found over '''18''' reactions in the full pathway |
* [[ACETYL-COA-ACETYLTRANSFER-RXN]] | * [[ACETYL-COA-ACETYLTRANSFER-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
*** [[SJ09371]] | *** [[SJ09371]] | ||
| − | |||
*** [[SJ14898]] | *** [[SJ14898]] | ||
| + | *** [[SJ21818]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| − | * [[ | + | *** [[orthology-nannochloropsis_salina]] |
| − | ** | + | *** [[orthology-ectocarpus_siliculosus]] |
| + | * [[BIOTIN-CARBOXYL-RXN]] | ||
| + | ** 8 associated gene(s): | ||
| + | *** [[SJ00485]] | ||
*** [[SJ14529]] | *** [[SJ14529]] | ||
| + | *** [[SJ14528]] | ||
*** [[SJ12870]] | *** [[SJ12870]] | ||
| − | |||
| − | |||
*** [[SJ02214]] | *** [[SJ02214]] | ||
*** [[SJ12670]] | *** [[SJ12670]] | ||
| − | |||
*** [[SJ17987]] | *** [[SJ17987]] | ||
*** [[SJ06726]] | *** [[SJ06726]] | ||
| − | ** | + | ** 1 reconstruction source(s) associated: |
| − | + | ||
| − | + | ||
| − | + | ||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
* [[PROPIONYL-COA-CARBOXY-RXN]] | * [[PROPIONYL-COA-CARBOXY-RXN]] | ||
| Line 42: | Line 38: | ||
*** [[SJ08104]] | *** [[SJ08104]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RXN-11662]] | * [[RXN-11662]] | ||
** 8 associated gene(s): | ** 8 associated gene(s): | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
*** [[SJ21390]] | *** [[SJ21390]] | ||
*** [[SJ17348]] | *** [[SJ17348]] | ||
| + | *** [[SJ16470]] | ||
| + | *** [[SJ16180]] | ||
| + | *** [[SJ03584]] | ||
| + | *** [[SJ06127]] | ||
| + | *** [[SJ07211]] | ||
| + | *** [[SJ01444]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
* [[RXN-11667]] | * [[RXN-11667]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
*** [[SJ03584]] | *** [[SJ03584]] | ||
| − | |||
*** [[SJ03913]] | *** [[SJ03913]] | ||
| − | ** | + | *** [[SJ07211]] |
| + | ** 3 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| + | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
* [[RXN-6383]] | * [[RXN-6383]] | ||
** 4 associated gene(s): | ** 4 associated gene(s): | ||
| − | |||
| − | |||
*** [[SJ21390]] | *** [[SJ21390]] | ||
| + | *** [[SJ00040]] | ||
| + | *** [[SJ03913]] | ||
*** [[SJ07211]] | *** [[SJ07211]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| − | |||
*** [[orthology-nannochloropsis_salina]] | *** [[orthology-nannochloropsis_salina]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
| + | * [[RXN0-5055]] | ||
| + | ** 5 associated gene(s): | ||
| + | *** [[SJ14528]] | ||
| + | *** [[SJ17987]] | ||
| + | *** [[SJ00484]] | ||
| + | *** [[SJ14529]] | ||
| + | *** [[SJ06726]] | ||
| + | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
| + | * [[RXN0-5224]] | ||
| + | ** 14 associated gene(s): | ||
| + | *** [[SJ07324]] | ||
| + | *** [[SJ21158]] | ||
| + | *** [[SJ17783]] | ||
| + | *** [[SJ18140]] | ||
| + | *** [[SJ18142]] | ||
| + | *** [[SJ18141]] | ||
| + | *** [[SJ07765]] | ||
| + | *** [[SJ13240]] | ||
| + | *** [[SJ07587]] | ||
| + | *** [[SJ22175]] | ||
| + | *** [[SJ18135]] | ||
| + | *** [[SJ13238]] | ||
| + | *** [[SJ12311]] | ||
| + | *** [[SJ07762]] | ||
| + | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
== Reaction(s) not found == | == Reaction(s) not found == | ||
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN] | * [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN] | ||
| Line 94: | Line 118: | ||
{{#set: common name=3-hydroxypropanoate/4-hydroxybutanate cycle}} | {{#set: common name=3-hydroxypropanoate/4-hydroxybutanate cycle}} | ||
{{#set: common name=3-HP/4-HB cycle|3-hydroxypropionate/4-hydroxybutyrate cycle}} | {{#set: common name=3-HP/4-HB cycle|3-hydroxypropionate/4-hydroxybutyrate cycle}} | ||
| − | {{#set: reaction found= | + | {{#set: reaction found=8}} |
| − | {{#set: total reaction= | + | {{#set: total reaction=18}} |
| − | {{#set: completion rate= | + | {{#set: completion rate=44.0}} |
Latest revision as of 12:20, 10 January 2019
Pathway PWY-5789
- taxonomic range:
- common name:
- 3-hydroxypropanoate/4-hydroxybutanate cycle
- Synonym(s):
- 3-HP/4-HB cycle
- 3-hydroxypropionate/4-hydroxybutyrate cycle
Reaction(s) found
8 reactions found over 18 reactions in the full pathway
- ACETYL-COA-ACETYLTRANSFER-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- BIOTIN-CARBOXYL-RXN
- PROPIONYL-COA-CARBOXY-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- RXN-11662
- 8 associated gene(s):
- 4 reconstruction source(s) associated:
- RXN-11667
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- RXN-6383
- 4 associated gene(s):
- 3 reconstruction source(s) associated:
- RXN0-5055
- 5 associated gene(s):
- 2 reconstruction source(s) associated:
- RXN0-5224
Reaction(s) not found
- METHYLMALONYL-COA-EPIM-RXN
- METHYLMALONYL-COA-MUT-RXN
- RXN-11002
- RXN-8890
- RXN-8891
- RXN-8963
- RXN-8974
- RXN-9086
- RXN-9087
- RXN-9092
