Difference between revisions of "RXN-9537"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9537 RXN-9537] == * direction: ** LEFT-TO-RIGHT * common name: ** fatty acid synthase ** (3R)-3...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** fatty acid synthase
 
−
** (3R)-3-hydroxymyristoyl-[acyl-carrier protein] dehydratase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 +
* common name:
 +
** fatty acid synthase
 +
** (3R)-3-hydroxymyristoyl-[acyl-carrier protein] dehydratase
 
* Synonym(s):
 
* Synonym(s):
 
** (3R)-hydroxymyristoyl-ACP dehydratase
 
** (3R)-hydroxymyristoyl-ACP dehydratase
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''=>''' 1 [[Tetradec-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Tetradec-2-enoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxymyristoyl-[acp][c] '''=>''' 1 a trans tetradec-2-enoyl-[acp][c] '''+''' 1 H2O[c]
+
** 1 a (3R)-3-hydroxymyristoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans tetradec-2-enoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ18059]]
+
* Gene: [[SJ19629]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06617]]
+
* Gene: [[SJ18059]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00613]]
+
* Gene: [[SJ03883]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00320]]
+
* Gene: [[SJ06617]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ19629]]
+
* Gene: [[SJ11672]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
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** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ15983]]
+
* Gene: [[SJ13014]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11672]]
+
* Gene: [[SJ00613]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03883]]
+
* Gene: [[SJ00320]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ06944]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
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** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ13014]]
+
* Gene: [[SJ06944]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ06616]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ15983]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
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*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ06616]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
Line 84: Line 84:
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=fatty acid synthase}}
 
−
{{#set: common name=(3R)-3-hydroxymyristoyl-[acyl-carrier protein] dehydratase}}
 
 
{{#set: ec number=EC-2.3.1.86}}
 
{{#set: ec number=EC-2.3.1.86}}
 
{{#set: ec number=EC-2.3.1.85}}
 
{{#set: ec number=EC-2.3.1.85}}
 
{{#set: ec number=EC-4.2.1.59}}
 
{{#set: ec number=EC-4.2.1.59}}
 +
{{#set: common name=fatty acid synthase}}
 +
{{#set: common name=(3R)-3-hydroxymyristoyl-[acyl-carrier protein] dehydratase}}
 
{{#set: common name=(3R)-hydroxymyristoyl-ACP dehydratase}}
 
{{#set: common name=(3R)-hydroxymyristoyl-ACP dehydratase}}
−
{{#set: gene associated=SJ18059|SJ06617|SJ00613|SJ00320|SJ19629|SJ17743|SJ15983|SJ11672|SJ03883|SJ06944|SJ04769|SJ10624|SJ04443|SJ13014|SJ10275|SJ06616}}
+
{{#set: gene associated=SJ19629|SJ18059|SJ03883|SJ06617|SJ11672|SJ17743|SJ13014|SJ00613|SJ00320|SJ04769|SJ10624|SJ04443|SJ06944|SJ06616|SJ15983|SJ10275}}
 
{{#set: in pathway=PWY-5971|PWY-5994}}
 
{{#set: in pathway=PWY-5971|PWY-5994}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 12:22, 10 January 2019

Reaction RXN-9537

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • fatty acid synthase
    • (3R)-3-hydroxymyristoyl-[acyl-carrier protein] dehydratase
  • Synonym(s):
    • (3R)-hydroxymyristoyl-ACP dehydratase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"(3R)-3-hydroxymyristoyl-[acyl-carrier protein] dehydratase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-9537&oldid=15075"