Difference between revisions of "GLUCONEO-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-475...")
 
 
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== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''13''' reactions found over '''13''' reactions in the full pathway
+
  '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[1.1.1.39-RXN]]
 
* [[1.1.1.39-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[SJ14191]]
 
 
*** [[SJ13180]]
 
*** [[SJ13180]]
 
*** [[SJ11643]]
 
*** [[SJ11643]]
 +
*** [[SJ14191]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[2PGADEHYDRAT-RXN]]
 
* [[2PGADEHYDRAT-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[SJ13450]]
 
 
*** [[SJ08386]]
 
*** [[SJ08386]]
 
*** [[SJ17529]]
 
*** [[SJ17529]]
 +
*** [[SJ13450]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[3PGAREARR-RXN]]
 
* [[3PGAREARR-RXN]]
 
** 12 associated gene(s):
 
** 12 associated gene(s):
−
*** [[SJ21685]]
 
 
*** [[SJ16156]]
 
*** [[SJ16156]]
−
*** [[SJ12299]]
 
−
*** [[SJ14916]]
 
 
*** [[SJ21024]]
 
*** [[SJ21024]]
−
*** [[SJ09590]]
 
−
*** [[SJ12497]]
 
−
*** [[SJ15529]]
 
−
*** [[SJ13678]]
 
 
*** [[SJ01345]]
 
*** [[SJ01345]]
 +
*** [[SJ09590]]
 
*** [[SJ14984]]
 
*** [[SJ14984]]
 +
*** [[SJ13678]]
 +
*** [[SJ14916]]
 +
*** [[SJ15529]]
 +
*** [[SJ21685]]
 
*** [[SJ14704]]
 
*** [[SJ14704]]
 +
*** [[SJ12497]]
 +
*** [[SJ12299]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[F16ALDOLASE-RXN]]
 
* [[F16ALDOLASE-RXN]]
 
** 5 associated gene(s):
 
** 5 associated gene(s):
−
*** [[SJ21513]]
 
 
*** [[SJ22520]]
 
*** [[SJ22520]]
 
*** [[SJ12479]]
 
*** [[SJ12479]]
−
*** [[SJ17964]]
 
 
*** [[SJ13560]]
 
*** [[SJ13560]]
 +
*** [[SJ17964]]
 +
*** [[SJ21513]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[F16BDEPHOS-RXN]]
 
* [[F16BDEPHOS-RXN]]
 
** 7 associated gene(s):
 
** 7 associated gene(s):
 +
*** [[SJ14175]]
 +
*** [[SJ16950]]
 +
*** [[SJ17320]]
 +
*** [[SJ13518]]
 
*** [[SJ14821]]
 
*** [[SJ14821]]
 
*** [[SJ10463]]
 
*** [[SJ10463]]
−
*** [[SJ13518]]
 
−
*** [[SJ16950]]
 
−
*** [[SJ14175]]
 
 
*** [[SJ20807]]
 
*** [[SJ20807]]
−
*** [[SJ17320]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[GAPOXNPHOSPHN-RXN]]
 
* [[GAPOXNPHOSPHN-RXN]]
 
** 5 associated gene(s):
 
** 5 associated gene(s):
 +
*** [[SJ05204]]
 +
*** [[SJ07665]]
 
*** [[SJ00348]]
 
*** [[SJ00348]]
 
*** [[SJ05251]]
 
*** [[SJ05251]]
−
*** [[SJ05204]]
 
 
*** [[SJ14154]]
 
*** [[SJ14154]]
−
*** [[SJ07665]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[MALATE-DEH-RXN]]
 
* [[MALATE-DEH-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
 +
*** [[SJ15746]]
 +
*** [[SJ05075]]
 
*** [[SJ15523]]
 
*** [[SJ15523]]
−
*** [[SJ05075]]
 
−
*** [[SJ15746]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[MALIC-NADP-RXN]]
 
* [[MALIC-NADP-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[SJ11643]]
 
 
*** [[SJ14191]]
 
*** [[SJ14191]]
 
*** [[SJ13180]]
 
*** [[SJ13180]]
 +
*** [[SJ11643]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[PEPCARBOXYKIN-RXN]]
 
* [[PEPCARBOXYKIN-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
Line 110: Line 110:
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
−
* [[PEPSYNTH-RXN]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[PGLUCISOM-RXN]]
 
* [[PGLUCISOM-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
Line 122: Line 118:
 
*** [[SJ08179]]
 
*** [[SJ08179]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[PHOSGLYPHOS-RXN]]
 
* [[PHOSGLYPHOS-RXN]]
 
** 6 associated gene(s):
 
** 6 associated gene(s):
−
*** [[SJ10780]]
 
−
*** [[SJ18020]]
 
−
*** [[SJ05024]]
 
 
*** [[SJ15992]]
 
*** [[SJ15992]]
−
*** [[SJ15971]]
+
*** [[SJ05024]]
 
*** [[SJ15991]]
 
*** [[SJ15991]]
 +
*** [[SJ18020]]
 +
*** [[SJ15971]]
 +
*** [[SJ10780]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[TRIOSEPISOMERIZATION-RXN]]
 
* [[TRIOSEPISOMERIZATION-RXN]]
 
** 5 associated gene(s):
 
** 5 associated gene(s):
 +
*** [[SJ10351]]
 +
*** [[SJ11011]]
 
*** [[SJ15388]]
 
*** [[SJ15388]]
 
*** [[SJ07665]]
 
*** [[SJ07665]]
−
*** [[SJ11011]]
 
 
*** [[SJ21027]]
 
*** [[SJ21027]]
−
*** [[SJ10351]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PEPSYNTH-RXN PEPSYNTH-RXN]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
 
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 
 
* ARACYC:
 
* ARACYC:
 
** [http://metacyc.org/ARA/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 
** [http://metacyc.org/ARA/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
* ECOCYC:
 +
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 
{{#set: taxonomic range=TAX-4751}}
 
{{#set: taxonomic range=TAX-4751}}
 
{{#set: taxonomic range=TAX-33090}}
 
{{#set: taxonomic range=TAX-33090}}
Line 160: Line 157:
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: common name=gluconeogenesis I}}
 
{{#set: common name=gluconeogenesis I}}
−
{{#set: reaction found=13}}
+
{{#set: reaction found=12}}
 
{{#set: total reaction=13}}
 
{{#set: total reaction=13}}
−
{{#set: completion rate=100.0}}
+
{{#set: completion rate=92.0}}

Latest revision as of 12:29, 10 January 2019

Pathway GLUCONEO-PWY

Reaction(s) found

12 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=GLUCONEO-PWY&oldid=15297"