Difference between revisions of "RXN-12490"

Revision as of 09:15, 18 May 2018

Reaction RXN-12490

• direction:
  • LEFT-TO-RIGHT
• common name:
  • 3-hydroxyacyl-CoA dehydrogenase
  • (S)-3-hydroxydecanoyl-CoA dehydrogenase
• ec number:
  • EC-1.1.1.35
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD0-2244[c] + 1 NAD[c] => 1 CPD0-2123[c] + 1 PROTON[c] + 1 NADH[c]
• With common name(s):
  • 1 (S)-3-hydroxydecanoyl-CoA[c] + 1 NAD+[c] => 1 3-oxodecanoyl-CoA[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ03584
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
• Gene: SJ16180
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ01444
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ07211
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
• Gene: SJ06127
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ16470
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ17348
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ21390
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina

Pathways

• PWY-7094, fatty acid salvage: PWY-7094
  • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 31188
• LIGAND-RXN:
  • R04743