Difference between revisions of "RXN-14271"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14271 RXN-14271] == * direction: ** LEFT-TO-RIGHT * common name: ** (S)-3-hydroxypalmitoyl-CoA...")
 
 
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14271 RXN-14271] ==
 
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14271 RXN-14271] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.211 EC-1.1.1.211]
 
* common name:
 
* common name:
 
** (S)-3-hydroxypalmitoyl-CoA oxidoreductase
 
** (S)-3-hydroxypalmitoyl-CoA oxidoreductase
 
** long-chain-3-hydroxyacyl-CoA dehydrogenase
 
** long-chain-3-hydroxyacyl-CoA dehydrogenase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.211 EC-1.1.1.211]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD0-2232]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[3-OXOPALMITOYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[CPD0-2232]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[3-OXOPALMITOYL-COA]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-3-hydroxyhexadecanoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 3-oxo-palmitoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 (S)-3-hydroxyhexadecanoyl-CoA[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 3-oxo-palmitoyl-CoA[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
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** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ07211]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Gene: [[SJ21390]]
 
* Gene: [[SJ21390]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 32: Line 29:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
* Gene: [[SJ07211]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
 
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
** '''5''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
 
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
** '''4''' reactions found over '''22''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 53: Line 53:
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04737 R04737]
 
** [http://www.genome.jp/dbget-bin/www_bget?R04737 R04737]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-1.1.1.211}}
 
{{#set: common name=(S)-3-hydroxypalmitoyl-CoA oxidoreductase}}
 
{{#set: common name=(S)-3-hydroxypalmitoyl-CoA oxidoreductase}}
 
{{#set: common name=long-chain-3-hydroxyacyl-CoA dehydrogenase}}
 
{{#set: common name=long-chain-3-hydroxyacyl-CoA dehydrogenase}}
−
{{#set: ec number=EC-1.1.1.211}}
+
{{#set: gene associated=SJ03584|SJ21390|SJ16470|SJ07211}}
−
{{#set: gene associated=SJ03584|SJ07211|SJ21390|SJ16470}}
+
 
{{#set: in pathway=PWY-7654|PWY-7656}}
 
{{#set: in pathway=PWY-7654|PWY-7656}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 11:40, 10 January 2019

Reaction RXN-14271

  • direction:
    • REVERSIBLE
  • ec number:
  • common name:
    • (S)-3-hydroxypalmitoyl-CoA oxidoreductase
    • long-chain-3-hydroxyacyl-CoA dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxyhexadecanoyl-CoA[c] + 1 NAD+[c] <=> 1 NADH[c] + 1 3-oxo-palmitoyl-CoA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 5 reactions found over 11 reactions in the full pathway
  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 4 reactions found over 22 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-14271&oldid=15656"