Difference between revisions of "RXN-16041"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16041 RXN-16041] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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| Line 9: | Line 9: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CPD-17278]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-14392]][c] '''+''' 1 [[Glycerolipids]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a [glycerolipid]-stearidonate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 stearidonoyl-CoA[c] '''+''' 1 a glycerolipid[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ22477]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ13643]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 36: | Line 36: | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: ec number=EC-2.3.1.23}} | {{#set: ec number=EC-2.3.1.23}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=SJ22477|SJ13643|SJ09127}} |
{{#set: in pathway=PWY-6958}} | {{#set: in pathway=PWY-6958}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 11:42, 10 January 2019
Contents
Reaction RXN-16041
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-17278[c] + 1 CO-A[c] => 1 CPD-14392[c] + 1 Glycerolipids[c]
- With common name(s):
- 1 a [glycerolipid]-stearidonate[c] + 1 coenzyme A[c] => 1 stearidonoyl-CoA[c] + 1 a glycerolipid[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ22477
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ13643
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ09127
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes): PWY-6958
- 5 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
