Difference between revisions of "RXN-13304"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13304 RXN-13304] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxy-lignoceroyl-CoA d...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134] | ** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134] | ||
| + | * common name: | ||
| + | ** 3-hydroxy-lignoceroyl-CoA dehydratase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 17: | Line 17: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ00783]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ06882]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036] | * [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036] | ||
| − | ** ''' | + | ** '''14''' reactions found over '''16''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 32: | Line 32: | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-4.2.1.134}} | {{#set: ec number=EC-4.2.1.134}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=3-hydroxy-lignoceroyl-CoA dehydratase}} |
| + | {{#set: gene associated=SJ00783|SJ06882}} | ||
{{#set: in pathway=PWY-7036}} | {{#set: in pathway=PWY-7036}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 11:49, 10 January 2019
Contents
Reaction RXN-13304
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 3-hydroxy-lignoceroyl-CoA dehydratase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 (3R)-3-hydroxy-lignoceroyl-CoA[c] => 1 trans-lignocer-2-enoyl-CoA[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00783
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06882
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
- 14 reactions found over 16 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
