Difference between revisions of "PWY-7511"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
 
Line 4: Line 4:
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
** protein ubiquitylation
+
** protein ubiquitination
 
* Synonym(s):
 
* Synonym(s):
 +
** protein ubiquitylation
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''9''' reactions found over '''9''' reactions in the full pathway
+
  '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[RXN-15556]]
 
* [[RXN-15556]]
 
** 22 associated gene(s):
 
** 22 associated gene(s):
 +
*** [[SJ20603]]
 +
*** [[SJ20646]]
 +
*** [[SJ07373]]
 +
*** [[SJ02926]]
 
*** [[SJ16104]]
 
*** [[SJ16104]]
 +
*** [[SJ14442]]
 +
*** [[SJ19416]]
 +
*** [[SJ21005]]
 +
*** [[SJ21313]]
 +
*** [[SJ00403]]
 
*** [[SJ18583]]
 
*** [[SJ18583]]
*** [[SJ21005]]
 
*** [[SJ18713]]
 
*** [[SJ07373]]
 
 
*** [[SJ08916]]
 
*** [[SJ08916]]
 
*** [[SJ18681]]
 
*** [[SJ18681]]
*** [[SJ14442]]
+
*** [[SJ15747]]
*** [[SJ20603]]
+
*** [[SJ18713]]
*** [[SJ10760]]
+
*** [[SJ15117]]
 +
*** [[SJ00896]]
 
*** [[SJ20124]]
 
*** [[SJ20124]]
 
*** [[SJ19385]]
 
*** [[SJ19385]]
*** [[SJ02926]]
+
*** [[SJ10760]]
*** [[SJ15117]]
+
 
*** [[SJ22197]]
 
*** [[SJ22197]]
 
*** [[SJ13418]]
 
*** [[SJ13418]]
*** [[SJ19416]]
 
*** [[SJ21313]]
 
*** [[SJ00896]]
 
*** [[SJ20646]]
 
*** [[SJ00403]]
 
*** [[SJ15747]]
 
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[RXN-15559]]
 
* [[RXN-15559]]
 
** 33 associated gene(s):
 
** 33 associated gene(s):
 +
*** [[SJ12751]]
 +
*** [[SJ19160]]
 +
*** [[SJ19152]]
 
*** [[SJ06889]]
 
*** [[SJ06889]]
*** [[SJ06876]]
+
*** [[SJ09535]]
*** [[SJ05166]]
+
*** [[SJ20681]]
*** [[SJ14399]]
+
*** [[SJ06449]]
+
*** [[SJ00945]]
+
*** [[SJ10665]]
+
*** [[SJ13840]]
+
 
*** [[SJ17121]]
 
*** [[SJ17121]]
*** [[SJ20681]]
+
*** [[SJ05828]]
 +
*** [[SJ01128]]
 +
*** [[SJ19693]]
 +
*** [[SJ03332]]
 
*** [[SJ05155]]
 
*** [[SJ05155]]
*** [[SJ19160]]
+
*** [[SJ03333]]
*** [[SJ12751]]
+
*** [[SJ00945]]
 +
*** [[SJ00224]]
 +
*** [[SJ02976]]
 +
*** [[SJ06876]]
 
*** [[SJ14443]]
 
*** [[SJ14443]]
*** [[SJ03333]]
+
*** [[SJ10665]]
 +
*** [[SJ14399]]
 +
*** [[SJ10358]]
 +
*** [[SJ06452]]
 +
*** [[SJ00975]]
 
*** [[SJ06699]]
 
*** [[SJ06699]]
*** [[SJ00975]]
+
*** [[SJ05166]]
 
*** [[SJ00071]]
 
*** [[SJ00071]]
*** [[SJ05828]]
+
*** [[SJ06449]]
*** [[SJ19152]]
+
*** [[SJ06452]]
+
*** [[SJ10358]]
+
*** [[SJ01128]]
+
*** [[SJ10664]]
+
*** [[SJ03332]]
+
*** [[SJ00224]]
+
 
*** [[SJ13673]]
 
*** [[SJ13673]]
 
*** [[SJ20496]]
 
*** [[SJ20496]]
*** [[SJ19693]]
+
*** [[SJ13840]]
*** [[SJ09535]]
+
 
*** [[SJ17724]]
 
*** [[SJ17724]]
 
*** [[SJ07230]]
 
*** [[SJ07230]]
*** [[SJ02976]]
+
*** [[SJ10664]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 
* [[RXN-15560]]
 
* [[RXN-15560]]
 
** 33 associated gene(s):
 
** 33 associated gene(s):
*** [[SJ06876]]
+
*** [[SJ13673]]
*** [[SJ01128]]
+
*** [[SJ09535]]
+
 
*** [[SJ00975]]
 
*** [[SJ00975]]
*** [[SJ13673]]
+
*** [[SJ10664]]
*** [[SJ02976]]
+
*** [[SJ19160]]
 +
*** [[SJ12751]]
 
*** [[SJ17121]]
 
*** [[SJ17121]]
*** [[SJ12751]]
 
*** [[SJ06449]]
 
*** [[SJ10358]]
 
*** [[SJ00224]]
 
*** [[SJ00945]]
 
*** [[SJ06889]]
 
 
*** [[SJ05166]]
 
*** [[SJ05166]]
*** [[SJ07230]]
 
*** [[SJ06452]]
 
 
*** [[SJ14399]]
 
*** [[SJ14399]]
 
*** [[SJ20681]]
 
*** [[SJ20681]]
*** [[SJ20496]]
+
*** [[SJ06452]]
*** [[SJ10665]]
+
*** [[SJ00071]]
*** [[SJ10664]]
+
*** [[SJ19693]]
 +
*** [[SJ05155]]
 +
*** [[SJ07230]]
 +
*** [[SJ13840]]
 
*** [[SJ05828]]
 
*** [[SJ05828]]
 +
*** [[SJ10665]]
 +
*** [[SJ01128]]
 +
*** [[SJ09535]]
 +
*** [[SJ02976]]
 +
*** [[SJ06876]]
 +
*** [[SJ06889]]
 
*** [[SJ03333]]
 
*** [[SJ03333]]
*** [[SJ05155]]
+
*** [[SJ17724]]
 +
*** [[SJ10358]]
 
*** [[SJ19152]]
 
*** [[SJ19152]]
*** [[SJ00071]]
+
*** [[SJ00945]]
*** [[SJ19693]]
+
 
*** [[SJ14443]]
 
*** [[SJ14443]]
 +
*** [[SJ20496]]
 
*** [[SJ06699]]
 
*** [[SJ06699]]
*** [[SJ13840]]
+
*** [[SJ06449]]
*** [[SJ17724]]
+
*** [[SJ00224]]
 
*** [[SJ03332]]
 
*** [[SJ03332]]
*** [[SJ19160]]
 
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 
* [[RXN-15561]]
 
* [[RXN-15561]]
 
** 45 associated gene(s):
 
** 45 associated gene(s):
*** [[SJ22265]]
+
*** [[SJ00972]]
*** [[SJ19061]]
+
*** [[SJ04102]]
 +
*** [[SJ06176]]
 +
*** [[SJ00621]]
 +
*** [[SJ03727]]
 +
*** [[SJ05626]]
 +
*** [[SJ02273]]
 +
*** [[SJ03975]]
 
*** [[SJ04324]]
 
*** [[SJ04324]]
*** [[SJ15797]]
+
*** [[SJ21686]]
*** [[SJ06602]]
+
*** [[SJ13742]]
+
 
*** [[SJ11122]]
 
*** [[SJ11122]]
*** [[SJ05626]]
+
*** [[SJ19061]]
*** [[SJ17379]]
+
*** [[SJ21688]]
*** [[SJ22546]]
+
*** [[SJ19253]]
 +
*** [[SJ21572]]
 +
*** [[SJ15828]]
 +
*** [[SJ15544]]
 
*** [[SJ02711]]
 
*** [[SJ02711]]
 
*** [[SJ00056]]
 
*** [[SJ00056]]
*** [[SJ21686]]
+
*** [[SJ11923]]
*** [[SJ06991]]
+
*** [[SJ08227]]
*** [[SJ03727]]
+
*** [[SJ22546]]
*** [[SJ12138]]
+
*** [[SJ12854]]
+
*** [[SJ02273]]
+
*** [[SJ06296]]
+
*** [[SJ02709]]
+
*** [[SJ07233]]
+
 
*** [[SJ04322]]
 
*** [[SJ04322]]
*** [[SJ02681]]
+
*** [[SJ17070]]
*** [[SJ07902]]
+
*** [[SJ03726]]
 
*** [[SJ09000]]
 
*** [[SJ09000]]
*** [[SJ00972]]
 
*** [[SJ15828]]
 
*** [[SJ15544]]
 
 
*** [[SJ14203]]
 
*** [[SJ14203]]
*** [[SJ03726]]
+
*** [[SJ12854]]
*** [[SJ03975]]
+
*** [[SJ04560]]
*** [[SJ06176]]
+
*** [[SJ06254]]
 
*** [[SJ00781]]
 
*** [[SJ00781]]
*** [[SJ21572]]
+
*** [[SJ06991]]
*** [[SJ21688]]
+
*** [[SJ06254]]
+
*** [[SJ19253]]
+
*** [[SJ08227]]
+
*** [[SJ11923]]
+
 
*** [[SJ01880]]
 
*** [[SJ01880]]
*** [[SJ04560]]
+
*** [[SJ13742]]
 +
*** [[SJ07233]]
 +
*** [[SJ02709]]
 +
*** [[SJ22265]]
 +
*** [[SJ06296]]
 +
*** [[SJ15797]]
 +
*** [[SJ06602]]
 +
*** [[SJ12138]]
 +
*** [[SJ02681]]
 +
*** [[SJ07902]]
 +
*** [[SJ17379]]
 
*** [[SJ07569]]
 
*** [[SJ07569]]
*** [[SJ17070]]
 
*** [[SJ00621]]
 
*** [[SJ04102]]
 
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
Line 167: Line 168:
 
** 1 associated gene(s):
 
** 1 associated gene(s):
 
*** [[SJ20124]]
 
*** [[SJ20124]]
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
* [[RXN-16313]]
 
** 0 associated gene:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
* [[RXN-16314]]
 
** 0 associated gene:
 
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** 157 associated gene(s):
 
** 157 associated gene(s):
*** [[SJ18583]]
 
*** [[SJ02976]]
 
*** [[SJ02926]]
 
*** [[SJ13312]]
 
*** [[SJ16898]]
 
*** [[SJ00224]]
 
*** [[SJ04560]]
 
*** [[SJ02681]]
 
*** [[SJ13742]]
 
*** [[SJ06450]]
 
*** [[SJ07569]]
 
*** [[SJ03332]]
 
*** [[SJ02053]]
 
*** [[SJ21688]]
 
*** [[SJ20496]]
 
*** [[SJ16890]]
 
*** [[SJ00781]]
 
 
*** [[SJ18681]]
 
*** [[SJ18681]]
*** [[SJ07231]]
+
*** [[SJ01397]]
*** [[SJ00403]]
+
*** [[SJ07569]]
*** [[SJ19416]]
+
*** [[SJ19385]]
*** [[SJ14705]]
+
*** [[SJ10358]]
*** [[SJ05166]]
+
*** [[SJ00318]]
 +
*** [[SJ02709]]
 +
*** [[SJ06450]]
 +
*** [[SJ22393]]
 +
*** [[SJ22635]]
 +
*** [[SJ21877]]
 +
*** [[SJ20603]]
 +
*** [[SJ07233]]
 +
*** [[SJ15189]]
 +
*** [[SJ06595]]
 +
*** [[SJ13418]]
 +
*** [[SJ21005]]
 +
*** [[SJ13840]]
 
*** [[SJ20646]]
 
*** [[SJ20646]]
*** [[SJ08236]]
 
*** [[SJ02273]]
 
 
*** [[SJ03227]]
 
*** [[SJ03227]]
*** [[SJ21005]]
 
*** [[SJ20672]]
 
 
*** [[SJ13409]]
 
*** [[SJ13409]]
 +
*** [[SJ15828]]
 +
*** [[SJ14442]]
 +
*** [[SJ20124]]
 +
*** [[SJ09421]]
 +
*** [[SJ12663]]
 +
*** [[SJ13415]]
 +
*** [[SJ07230]]
 +
*** [[SJ20681]]
 +
*** [[SJ05155]]
 +
*** [[SJ05989]]
 +
*** [[SJ02711]]
 +
*** [[SJ17724]]
 +
*** [[SJ15544]]
 +
*** [[SJ00896]]
 +
*** [[SJ19693]]
 +
*** [[SJ06991]]
 
*** [[SJ14056]]
 
*** [[SJ14056]]
*** [[SJ12161]]
+
*** [[SJ16614]]
*** [[SJ19693]]
+
*** [[SJ10760]]
*** [[SJ06138]]
+
*** [[SJ00071]]
+
*** [[SJ08227]]
+
*** [[SJ00294]]
+
*** [[SJ09535]]
+
*** [[SJ19385]]
+
*** [[SJ13813]]
+
*** [[SJ07508]]
+
*** [[SJ02712]]
+
*** [[SJ12965]]
+
*** [[SJ16295]]
+
*** [[SJ10355]]
+
 
*** [[SJ19160]]
 
*** [[SJ19160]]
*** [[SJ00804]]
+
*** [[SJ12138]]
*** [[SJ01027]]
+
*** [[SJ03300]]
*** [[SJ00318]]
+
*** [[SJ05166]]
*** [[SJ11943]]
+
*** [[SJ00056]]
+
*** [[SJ03333]]
+
*** [[SJ19910]]
+
*** [[SJ00945]]
+
 
*** [[SJ06699]]
 
*** [[SJ06699]]
*** [[SJ16614]]
+
*** [[SJ16897]]
*** [[SJ05813]]
+
*** [[SJ02976]]
*** [[SJ07684]]
+
*** [[SJ08163]]
*** [[SJ13418]]
+
*** [[SJ17379]]
+
*** [[SJ04757]]
+
*** [[SJ09214]]
+
*** [[SJ07902]]
+
*** [[SJ06602]]
+
*** [[SJ07230]]
+
*** [[SJ15747]]
+
*** [[SJ12138]]
+
*** [[SJ12663]]
+
*** [[SJ14442]]
+
*** [[SJ10760]]
+
*** [[SJ20124]]
+
*** [[SJ05989]]
+
*** [[SJ14102]]
+
*** [[SJ01128]]
+
*** [[SJ13626]]
+
 
*** [[SJ22265]]
 
*** [[SJ22265]]
 +
*** [[SJ00403]]
 
*** [[SJ14443]]
 
*** [[SJ14443]]
*** [[SJ17050]]
+
*** [[SJ02273]]
*** [[SJ22472]]
+
*** [[SJ00945]]
*** [[SJ05828]]
+
*** [[SJ13415]]
+
 
*** [[SJ17906]]
 
*** [[SJ17906]]
*** [[SJ06595]]
+
*** [[SJ03332]]
*** [[SJ21686]]
+
*** [[SJ17724]]
+
*** [[SJ10665]]
+
 
*** [[SJ02299]]
 
*** [[SJ02299]]
*** [[SJ10722]]
+
*** [[SJ01128]]
*** [[SJ20603]]
+
*** [[SJ16890]]
*** [[SJ01397]]
+
*** [[SJ20785]]
+
*** [[SJ04102]]
+
 
*** [[SJ16378]]
 
*** [[SJ16378]]
*** [[SJ16897]]
+
*** [[SJ00413]]
*** [[SJ10358]]
+
*** [[SJ17050]]
*** [[SJ21419]]
+
*** [[SJ22197]]
*** [[SJ17121]]
+
*** [[SJ01371]]
*** [[SJ19152]]
+
*** [[SJ19253]]
*** [[SJ03300]]
+
*** [[SJ00935]]
*** [[SJ20681]]
+
*** [[SJ12751]]
+
 
*** [[SJ06452]]
 
*** [[SJ06452]]
*** [[SJ06449]]
+
*** [[SJ16029]]
*** [[SJ08163]]
+
*** [[SJ20785]]
*** [[SJ01371]]
+
*** [[SJ09227]]
+
*** [[SJ02711]]
+
*** [[SJ05155]]
+
*** [[SJ11923]]
+
*** [[SJ02709]]
+
*** [[SJ21877]]
+
*** [[SJ04322]]
+
*** [[SJ03727]]
+
*** [[SJ09421]]
+
*** [[SJ00975]]
+
 
*** [[SJ09006]]
 
*** [[SJ09006]]
*** [[SJ22635]]
+
*** [[SJ00876]]
*** [[SJ00935]]
+
*** [[SJ09535]]
*** [[SJ15828]]
+
*** [[SJ02053]]
 +
*** [[SJ03333]]
 
*** [[SJ00972]]
 
*** [[SJ00972]]
*** [[SJ16104]]
+
*** [[SJ08227]]
 +
*** [[SJ09214]]
 +
*** [[SJ03727]]
 +
*** [[SJ13813]]
 +
*** [[SJ07373]]
 +
*** [[SJ02712]]
 +
*** [[SJ15747]]
 +
*** [[SJ14051]]
 +
*** [[SJ22472]]
 +
*** [[SJ04102]]
 +
*** [[SJ13626]]
 +
*** [[SJ07508]]
 +
*** [[SJ08129]]
 +
*** [[SJ06876]]
 +
*** [[SJ08236]]
 +
*** [[SJ07902]]
 +
*** [[SJ10665]]
 +
*** [[SJ18713]]
 +
*** [[SJ17379]]
 +
*** [[SJ06176]]
 +
*** [[SJ20672]]
 
*** [[SJ05626]]
 
*** [[SJ05626]]
 +
*** [[SJ04560]]
 +
*** [[SJ18583]]
 +
*** [[SJ21688]]
 +
*** [[SJ19700]]
 +
*** [[SJ11884]]
 +
*** [[SJ01365]]
 +
*** [[SJ21686]]
 +
*** [[SJ10355]]
 +
*** [[SJ04322]]
 +
*** [[SJ14102]]
 +
*** [[SJ11943]]
 +
*** [[SJ06138]]
 +
*** [[SJ19910]]
 
*** [[SJ10664]]
 
*** [[SJ10664]]
*** [[SJ19061]]
+
*** [[SJ17713]]
*** [[SJ00876]]
+
*** [[SJ00337]]
 
*** [[SJ02714]]
 
*** [[SJ02714]]
 +
*** [[SJ13312]]
 +
*** [[SJ06602]]
 +
*** [[SJ14705]]
 +
*** [[SJ16295]]
 +
*** [[SJ05828]]
 +
*** [[SJ03110]]
 
*** [[SJ14399]]
 
*** [[SJ14399]]
*** [[SJ00413]]
+
*** [[SJ09227]]
*** [[SJ00896]]
+
*** [[SJ05813]]
*** [[SJ16029]]
+
*** [[SJ06449]]
*** [[SJ07373]]
+
*** [[SJ20496]]
 +
*** [[SJ13673]]
 +
*** [[SJ00056]]
 +
*** [[SJ16898]]
 +
*** [[SJ10722]]
 +
*** [[SJ17660]]
 +
*** [[SJ13742]]
 +
*** [[SJ19416]]
 +
*** [[SJ02926]]
 
*** [[SJ09000]]
 
*** [[SJ09000]]
*** [[SJ13840]]
+
*** [[SJ00781]]
 +
*** [[SJ21419]]
 +
*** [[SJ16104]]
 +
*** [[SJ19061]]
 +
*** [[SJ01027]]
 +
*** [[SJ17121]]
 +
*** [[SJ07231]]
 +
*** [[SJ07684]]
 +
*** [[SJ00804]]
 
*** [[SJ06889]]
 
*** [[SJ06889]]
*** [[SJ14051]]
+
*** [[SJ12965]]
*** [[SJ17660]]
+
*** [[SJ04994]]
+
 
*** [[SJ03726]]
 
*** [[SJ03726]]
*** [[SJ06991]]
+
*** [[SJ00975]]
*** [[SJ17713]]
+
*** [[SJ00071]]
*** [[SJ19253]]
+
*** [[SJ04757]]
*** [[SJ22197]]
+
*** [[SJ00224]]
*** [[SJ01365]]
+
*** [[SJ19152]]
*** [[SJ03110]]
+
*** [[SJ12161]]
 +
*** [[SJ02681]]
 
*** [[SJ19309]]
 
*** [[SJ19309]]
*** [[SJ06176]]
+
*** [[SJ00294]]
*** [[SJ18713]]
+
*** [[SJ11923]]
*** [[SJ07233]]
+
*** [[SJ04994]]
*** [[SJ08129]]
+
*** [[SJ12751]]
*** [[SJ15544]]
+
*** [[SJ13673]]
+
*** [[SJ06876]]
+
*** [[SJ15189]]
+
*** [[SJ00337]]
+
*** [[SJ22393]]
+
*** [[SJ19700]]
+
*** [[SJ11884]]
+
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16313 RXN-16313]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16314 RXN-16314]
 
== External links  ==
 
== External links  ==
 
{{#set: taxonomic range=TAX-2759}}
 
{{#set: taxonomic range=TAX-2759}}
 +
{{#set: common name=protein ubiquitination}}
 
{{#set: common name=protein ubiquitylation}}
 
{{#set: common name=protein ubiquitylation}}
{{#set: reaction found=9}}
+
{{#set: reaction found=7}}
 
{{#set: total reaction=9}}
 
{{#set: total reaction=9}}
{{#set: completion rate=100.0}}
+
{{#set: completion rate=78.0}}

Latest revision as of 13:07, 10 January 2019

Pathway PWY-7511

  • taxonomic range:
  • common name:
    • protein ubiquitination
  • Synonym(s):
    • protein ubiquitylation

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links