Difference between revisions of "1.14.11.1-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.1-RXN 1.14.11.1-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** γ-butyrobetai...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** γ-butyrobetaine dioxygenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.14.11.1 EC-1.14.11.1]
 
** [http://enzyme.expasy.org/EC/1.14.11.1 EC-1.14.11.1]
 +
* common name:
 +
** γ-butyrobetaine dioxygenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GAMMA-BUTYROBETAINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARNITINE]][c]
+
** 1 [[GAMMA-BUTYROBETAINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARNITINE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 γ-butyrobetaine[c] '''+''' 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 L-carnitine[c]
+
** 1 γ-butyrobetaine[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 L-carnitine[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ01883]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
 
* Gene: [[SJ01929]]
 
* Gene: [[SJ01929]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
* Gene: [[SJ11793]]
 
* Gene: [[SJ11793]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ01883]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
Line 30: Line 30:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
 
* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 37: Line 37:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24028 24028]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24029 24029]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02397 R02397]
 
** [http://www.genome.jp/dbget-bin/www_bget?R02397 R02397]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=γ-butyrobetaine dioxygenase}}
 
 
{{#set: ec number=EC-1.14.11.1}}
 
{{#set: ec number=EC-1.14.11.1}}
−
{{#set: gene associated=SJ01883|SJ01929|SJ11793}}
+
{{#set: common name=γ-butyrobetaine dioxygenase}}
 +
{{#set: gene associated=SJ01929|SJ11793|SJ01883}}
 
{{#set: in pathway=PWY-3621|PWY-6100}}
 
{{#set: in pathway=PWY-3621|PWY-6100}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 12:08, 10 January 2019

Reaction 1.14.11.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • γ-butyrobetaine dioxygenase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3621, γ-butyrobetaine degradation: PWY-3621
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6100, L-carnitine biosynthesis: PWY-6100
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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