Difference between revisions of "RXN-1961"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1961 RXN-1961] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNAIle-lysidine synthetase *...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/6.3.4.19 EC-6.3.4.19] | ** [http://enzyme.expasy.org/EC/6.3.4.19 EC-6.3.4.19] | ||
| + | * common name: | ||
| + | ** tRNAIle-lysidine synthetase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[Cytidine-34-tRNAIle2]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Lysidine-tRNA-Ile2]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a cytidine34 in tRNAIle2[c] '''+''' 1 L-lysine[c] '''+''' 1 ATP[c] '''=>''' 1 a lysidine34 in tRNAIle2[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 2 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ22053]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ20061]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 29: | Line 29: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43745 43745] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R09597 R09597] | ** [http://www.genome.jp/dbget-bin/www_bget?R09597 R09597] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-6.3.4.19}} | {{#set: ec number=EC-6.3.4.19}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=tRNAIle-lysidine synthetase}} |
| + | {{#set: gene associated=SJ22053|SJ20061}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 13:27, 10 January 2019
Contents
Reaction RXN-1961
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- tRNAIle-lysidine synthetase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Cytidine-34-tRNAIle2[c] + 1 LYS[c] + 1 ATP[c] => 1 Lysidine-tRNA-Ile2[c] + 1 AMP[c] + 1 PPI[c] + 2 PROTON[c]
- With common name(s):
- 1 a cytidine34 in tRNAIle2[c] + 1 L-lysine[c] + 1 ATP[c] => 1 a lysidine34 in tRNAIle2[c] + 1 AMP[c] + 1 diphosphate[c] + 2 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ22053
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ20061
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
