Difference between revisions of "RXN0-1134"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate dehydrogenase (NAD...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
− | |||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1] | ** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1] | ||
+ | * common name: | ||
+ | ** pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase | ||
+ | ** pyruvate dehydrogenase (NAD+) | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine | + | ** 1 pyruvate[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''=>''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[SJ01042]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
+ | * Gene: [[SJ19470]] | ||
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ09312]] | * Gene: [[SJ09312]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | * Gene: [[ | + | * Gene: [[SJ00971]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
Line 31: | Line 35: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | |||
− | |||
− | |||
− | |||
== Pathways == | == Pathways == | ||
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY] | * [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY] | ||
Line 99: | Line 99: | ||
** [http://www.uniprot.org/uniprot/P10802 P10802] | ** [http://www.uniprot.org/uniprot/P10802 P10802] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
− | |||
{{#set: ec number=EC-1.2.4.1}} | {{#set: ec number=EC-1.2.4.1}} | ||
− | {{#set: gene associated= | + | {{#set: common name=pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase}} |
+ | {{#set: common name=pyruvate dehydrogenase (NAD+)}} | ||
+ | {{#set: gene associated=SJ01042|SJ19470|SJ09312|SJ00971|SJ14925}} | ||
{{#set: in pathway=PYRUVDEHYD-PWY}} | {{#set: in pathway=PYRUVDEHYD-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 12:28, 10 January 2019
Contents
Reaction RXN0-1134
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase
- pyruvate dehydrogenase (NAD+)
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PYRUVATE[c] + 1 Pyruvate-dehydrogenase-lipoate[c] + 1 PROTON[c] => 1 Pyruvate-dehydrogenase-acetylDHlipoyl[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 pyruvate[c] + 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] + 1 H+[c] => 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ01042
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ19470
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ09312
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ00971
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14925
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PYRUVDEHYD-PWY, pyruvate decarboxylation to acetyl CoA: PYRUVDEHYD-PWY
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
- UNIPROT:
- P06959
- P26267
- P35485
- Q59097
- Q9N1X8
- P45119
- P11966
- P35488
- P47515
- P21882
- P47516
- P21881
- P21873
- P16387
- P0AFG8
- P08559
- P11177
- P29803
- P29804
- P26284
- Q9JU08
- Q9CJD6
- Q9JU07
- Q9CJD5
- Q09171
- P52901
- P79931
- P79932
- Q9D051
- P10801
- P21874
- P49432
- Q59820
- P35486
- P35487
- Q06437
- P32473
- Q59107
- P73405
- Q49109
- O48685
- P52902
- P52904
- P52903
- O66112
- Q9Y8I5
- Q9Y8I6
- O69478
- P10802
"pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase" cannot be used as a page name in this wiki.