Difference between revisions of "PWY-5484"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
 
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== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''11''' reactions found over '''11''' reactions in the full pathway
+
  '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[2PGADEHYDRAT-RXN]]
 
* [[2PGADEHYDRAT-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[SJ13450]]
 
 
*** [[SJ08386]]
 
*** [[SJ08386]]
 
*** [[SJ17529]]
 
*** [[SJ17529]]
 +
*** [[SJ13450]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[3PGAREARR-RXN]]
 
* [[3PGAREARR-RXN]]
 
** 12 associated gene(s):
 
** 12 associated gene(s):
−
*** [[SJ21685]]
 
 
*** [[SJ16156]]
 
*** [[SJ16156]]
−
*** [[SJ12299]]
 
−
*** [[SJ14916]]
 
 
*** [[SJ21024]]
 
*** [[SJ21024]]
 +
*** [[SJ01345]]
 
*** [[SJ09590]]
 
*** [[SJ09590]]
−
*** [[SJ12497]]
+
*** [[SJ14984]]
−
*** [[SJ15529]]
+
 
*** [[SJ13678]]
 
*** [[SJ13678]]
−
*** [[SJ01345]]
+
*** [[SJ14916]]
−
*** [[SJ14984]]
+
*** [[SJ15529]]
 +
*** [[SJ21685]]
 
*** [[SJ14704]]
 
*** [[SJ14704]]
 +
*** [[SJ12497]]
 +
*** [[SJ12299]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[6PFRUCTPHOS-RXN]]
 
* [[6PFRUCTPHOS-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
 +
*** [[SJ16394]]
 
*** [[SJ02434]]
 
*** [[SJ02434]]
 
*** [[SJ04582]]
 
*** [[SJ04582]]
−
*** [[SJ16394]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[F16ALDOLASE-RXN]]
 
* [[F16ALDOLASE-RXN]]
 
** 5 associated gene(s):
 
** 5 associated gene(s):
−
*** [[SJ21513]]
 
 
*** [[SJ22520]]
 
*** [[SJ22520]]
 
*** [[SJ12479]]
 
*** [[SJ12479]]
 +
*** [[SJ13560]]
 
*** [[SJ17964]]
 
*** [[SJ17964]]
−
*** [[SJ13560]]
+
*** [[SJ21513]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[F16BDEPHOS-RXN]]
 
* [[F16BDEPHOS-RXN]]
 
** 7 associated gene(s):
 
** 7 associated gene(s):
 +
*** [[SJ14175]]
 +
*** [[SJ16950]]
 +
*** [[SJ17320]]
 +
*** [[SJ13518]]
 
*** [[SJ14821]]
 
*** [[SJ14821]]
 
*** [[SJ10463]]
 
*** [[SJ10463]]
−
*** [[SJ13518]]
 
−
*** [[SJ16950]]
 
−
*** [[SJ14175]]
 
 
*** [[SJ20807]]
 
*** [[SJ20807]]
−
*** [[SJ17320]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[GAPOXNPHOSPHN-RXN]]
 
* [[GAPOXNPHOSPHN-RXN]]
 
** 5 associated gene(s):
 
** 5 associated gene(s):
 +
*** [[SJ05204]]
 +
*** [[SJ07665]]
 
*** [[SJ00348]]
 
*** [[SJ00348]]
 
*** [[SJ05251]]
 
*** [[SJ05251]]
−
*** [[SJ05204]]
 
 
*** [[SJ14154]]
 
*** [[SJ14154]]
−
*** [[SJ07665]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[PEPDEPHOS-RXN]]
 
* [[PEPDEPHOS-RXN]]
 
** 4 associated gene(s):
 
** 4 associated gene(s):
−
*** [[SJ18192]]
 
 
*** [[SJ18193]]
 
*** [[SJ18193]]
−
*** [[SJ13451]]
 
 
*** [[SJ17585]]
 
*** [[SJ17585]]
 +
*** [[SJ18192]]
 +
*** [[SJ13451]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
−
* [[PEPSYNTH-RXN]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[PHOSGLYPHOS-RXN]]
 
* [[PHOSGLYPHOS-RXN]]
 
** 6 associated gene(s):
 
** 6 associated gene(s):
−
*** [[SJ10780]]
+
*** [[SJ15992]]
 +
*** [[SJ05024]]
 +
*** [[SJ15991]]
 
*** [[SJ18020]]
 
*** [[SJ18020]]
−
*** [[SJ05024]]
 
−
*** [[SJ15992]]
 
 
*** [[SJ15971]]
 
*** [[SJ15971]]
−
*** [[SJ15991]]
+
*** [[SJ10780]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[RXN-15513]]
 
* [[RXN-15513]]
 
** 6 associated gene(s):
 
** 6 associated gene(s):
 
*** [[SJ13678]]
 
*** [[SJ13678]]
 
*** [[SJ14916]]
 
*** [[SJ14916]]
 +
*** [[SJ21685]]
 +
*** [[SJ09590]]
 
*** [[SJ12497]]
 
*** [[SJ12497]]
 
*** [[SJ15529]]
 
*** [[SJ15529]]
−
*** [[SJ21685]]
 
−
*** [[SJ09590]]
 
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 
* [[TRIOSEPISOMERIZATION-RXN]]
 
* [[TRIOSEPISOMERIZATION-RXN]]
 
** 5 associated gene(s):
 
** 5 associated gene(s):
 +
*** [[SJ10351]]
 +
*** [[SJ11011]]
 
*** [[SJ15388]]
 
*** [[SJ15388]]
 
*** [[SJ07665]]
 
*** [[SJ07665]]
−
*** [[SJ11011]]
 
 
*** [[SJ21027]]
 
*** [[SJ21027]]
−
*** [[SJ10351]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PEPSYNTH-RXN PEPSYNTH-RXN]
 
== External links  ==
 
== External links  ==
 
* ECOCYC:
 
* ECOCYC:
Line 145: Line 142:
 
{{#set: taxonomic range=TAX-2157}}
 
{{#set: taxonomic range=TAX-2157}}
 
{{#set: common name=glycolysis II (from fructose 6-phosphate)}}
 
{{#set: common name=glycolysis II (from fructose 6-phosphate)}}
−
{{#set: reaction found=11}}
+
{{#set: reaction found=10}}
 
{{#set: total reaction=11}}
 
{{#set: total reaction=11}}
−
{{#set: completion rate=100.0}}
+
{{#set: completion rate=91.0}}

Latest revision as of 13:33, 10 January 2019

Pathway PWY-5484

  • taxonomic range:
  • common name:
    • glycolysis II (from fructose 6-phosphate)
  • Synonym(s):

Reaction(s) found

10 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=PWY-5484&oldid=17321"