Difference between revisions of "DIHYDROXYISOVALDEHYDRAT-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYISOVALDEHYDRAT-RXN DIHYDROXYISOVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9] | ** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9] | ||
| + | * common name: | ||
| + | ** 2,3-dihydroxy-isovalerate dehydratase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[CPD-13357]][c] '''=>''' 1 [[ | + | ** 1 [[CPD-13357]][c] '''=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] '''=>''' 1 | + | ** 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] '''=>''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 20: | Line 20: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] | * [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] | ||
| Line 37: | Line 37: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24810 24810] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R04441 R04441] | ** [http://www.genome.jp/dbget-bin/www_bget?R04441 R04441] | ||
| Line 49: | Line 51: | ||
** [http://www.uniprot.org/uniprot/P39522 P39522] | ** [http://www.uniprot.org/uniprot/P39522 P39522] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-4.2.1.9}} | {{#set: ec number=EC-4.2.1.9}} | ||
| + | {{#set: common name=2,3-dihydroxy-isovalerate dehydratase}} | ||
{{#set: gene associated=SJ19719}} | {{#set: gene associated=SJ19719}} | ||
{{#set: in pathway=VALSYN-PWY|PWY-7111}} | {{#set: in pathway=VALSYN-PWY|PWY-7111}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:33, 10 January 2019
Contents
Reaction DIHYDROXYISOVALDEHYDRAT-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 2,3-dihydroxy-isovalerate dehydratase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-13357[c] => 1 2-KETO-ISOVALERATE[c] + 1 WATER[c]
- With common name(s):
- 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] => 1 3-methyl-2-oxobutanoate[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ19719
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- VALSYN-PWY, L-valine biosynthesis: VALSYN-PWY
- 4 reactions found over 4 reactions in the full pathway
- PWY-7111, pyruvate fermentation to isobutanol (engineered): PWY-7111
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
