Difference between revisions of "DIHYDROXYMETVALDEHYDRAT-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9] | ||
* common name: | * common name: | ||
** 2,3-Dihydroxy-3-methylvalerate dehydratase | ** 2,3-Dihydroxy-3-methylvalerate dehydratase | ||
** 2,3-dihydroxy-3-methylvalerate hydro-lyase | ** 2,3-dihydroxy-3-methylvalerate hydro-lyase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
| Line 21: | Line 21: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104] | ||
| + | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103] | * [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103] | ||
| − | ** ''' | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| − | + | ||
| − | + | ||
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101] | * [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101] | ||
| − | ** ''' | + | ** '''4''' reactions found over '''8''' reactions in the full pathway |
| − | * [[ | + | * [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY] |
| − | ** '''4''' reactions found over ''' | + | ** '''4''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 43: | Line 43: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27695 27695] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070] | ** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070] | ||
| Line 56: | Line 56: | ||
** [http://www.uniprot.org/uniprot/P39522 P39522] | ** [http://www.uniprot.org/uniprot/P39522 P39522] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-4.2.1.9}} | ||
{{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}} | {{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}} | ||
{{#set: common name=2,3-dihydroxy-3-methylvalerate hydro-lyase}} | {{#set: common name=2,3-dihydroxy-3-methylvalerate hydro-lyase}} | ||
| − | |||
{{#set: gene associated=SJ19719}} | {{#set: gene associated=SJ19719}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-5104|PWY-5103|PWY-5101|ILEUSYN-PWY}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:59, 10 January 2019
Contents
Reaction DIHYDROXYMETVALDEHYDRAT-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 2,3-Dihydroxy-3-methylvalerate dehydratase
- 2,3-dihydroxy-3-methylvalerate hydro-lyase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 1-KETO-2-METHYLVALERATE[c] => 1 2-KETO-3-METHYL-VALERATE[c] + 1 WATER[c]
- With common name(s):
- 1 (R)-2,3-dihydroxy-3-methylpentanoate[c] => 1 (S)-3-methyl-2-oxopentanoate[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ19719
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
- 2 reactions found over 6 reactions in the full pathway
- PWY-5103, L-isoleucine biosynthesis III: PWY-5103
- 3 reactions found over 7 reactions in the full pathway
- PWY-5101, L-isoleucine biosynthesis II: PWY-5101
- 4 reactions found over 8 reactions in the full pathway
- ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
