Difference between revisions of "DIPHTINE--AMMONIA-LIGASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/6.3.1.14 EC-6.3.1.14] | ** [http://enzyme.expasy.org/EC/6.3.1.14 EC-6.3.1.14] | ||
| + | * common name: | ||
| + | ** diphthine—ammonia ligase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[DIPHTINE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a diphthine-[translation elongation factor 2][c] '''+''' 1 ammonium[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 a diphthamide-[translation elongation factor 2][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 21: | Line 21: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-7546]], diphthamide biosynthesis (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7546 PWY-7546] | * [[PWY-7546]], diphthamide biosynthesis (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7546 PWY-7546] | ||
** '''4''' reactions found over '''4''' reactions in the full pathway | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6482]], diphthamide biosynthesis (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6482 PWY-6482] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 31: | Line 31: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19754 19754] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613] | ** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-6.3.1.14}} | {{#set: ec number=EC-6.3.1.14}} | ||
| + | {{#set: common name=diphthine—ammonia ligase}} | ||
{{#set: gene associated=SJ03200}} | {{#set: gene associated=SJ03200}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-7546|PWY-6482}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 14:02, 10 January 2019
Contents
Reaction DIPHTINE--AMMONIA-LIGASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- diphthine—ammonia ligase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 a diphthine-[translation elongation factor 2][c] + 1 ammonium[c] + 1 ATP[c] => 1 H+[c] + 1 a diphthamide-[translation elongation factor 2][c] + 1 AMP[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ03200
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7546, diphthamide biosynthesis (eukaryotes): PWY-7546
- 4 reactions found over 4 reactions in the full pathway
- PWY-6482, diphthamide biosynthesis (archaea): PWY-6482
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
