Difference between revisions of "RXN-37"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-37 RXN-37] == * direction: ** LEFT-TO-RIGHT * common name: ** aldehyde dehydrogenase (NAD) ** 4...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
* common name:
 
* common name:
 
** aldehyde dehydrogenase (NAD)
 
** aldehyde dehydrogenase (NAD)
 
** 4-acetamidobutanal dehydrogenase
 
** 4-acetamidobutanal dehydrogenase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-30]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-35]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[CPD-30]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-35]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4-acetamidobutanal[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 4-acetamidobutanoate[c] '''+''' 2 H+[c] '''+''' 1 NADH[c]
+
** 1 4-acetamidobutanal[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''=>''' 1 4-acetamidobutanoate[c] '''+''' 1 NADH[c] '''+''' 2 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ11330]]
+
* Gene: [[SJ06047]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
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** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ10107]]
+
* Gene: [[SJ09287]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06047]]
+
* Gene: [[SJ00435]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
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*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ00435]]
+
* Gene: [[SJ11330]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11331]]
+
* Gene: [[SJ06359]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-arabidopsis_thaliana]]
+
* Gene: [[SJ06456]]
−
* Gene: [[SJ06470]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ22552]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ11331]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06359]]
+
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[SJ10107]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ09287]]
+
* Gene: [[SJ06470]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ06456]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ22552]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-0]], putrescine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-0 PWY-0]
 
* [[PWY-0]], putrescine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-0 PWY-0]
Line 74: Line 74:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31231 31231]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31232 31232]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R05050 R05050]
 
** [http://www.genome.jp/dbget-bin/www_bget?R05050 R05050]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.2.1.3}}
 
{{#set: common name=aldehyde dehydrogenase (NAD)}}
 
{{#set: common name=aldehyde dehydrogenase (NAD)}}
 
{{#set: common name=4-acetamidobutanal dehydrogenase}}
 
{{#set: common name=4-acetamidobutanal dehydrogenase}}
−
{{#set: ec number=EC-1.2.1.3}}
+
{{#set: gene associated=SJ06047|SJ17249|SJ09287|SJ00435|SJ05897|SJ11330|SJ06359|SJ06456|SJ11331|SJ10107|SJ06470|SJ22552}}
−
{{#set: gene associated=SJ11330|SJ17249|SJ10107|SJ06047|SJ05897|SJ00435|SJ11331|SJ06470|SJ22552|SJ06359|SJ09287|SJ06456}}
+
 
{{#set: in pathway=PWY-0}}
 
{{#set: in pathway=PWY-0}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:07, 10 January 2019

Reaction RXN-37

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • aldehyde dehydrogenase (NAD)
    • 4-acetamidobutanal dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-acetamidobutanal[c] + 1 H2O[c] + 1 NAD+[c] => 1 4-acetamidobutanoate[c] + 1 NADH[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-0, putrescine degradation III: PWY-0
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-37&oldid=18394"