Difference between revisions of "RXN-8654"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-ATP adenylate transfe...") |
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Line 4: | Line 4: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | |||
** lipoate-protein ligase | ** lipoate-protein ligase | ||
+ | ** lipoate-ATP adenylate transferase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[LIPOYL-AMP]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 H+[c] '''+''' 1 (R)-lipoate[c] '''+''' 1 ATP[c] '''=>''' 1 lipoyl-adenylate[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[SJ04393]] | ||
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: GO-TERM | ||
* Gene: [[SJ11692]] | * Gene: [[SJ11692]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
Line 22: | Line 25: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | |||
− | |||
− | |||
* Gene: [[SJ03663]] | * Gene: [[SJ03663]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984] | * [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984] | ||
** '''2''' reactions found over '''4''' reactions in the full pathway | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
Line 39: | Line 39: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12914 12914] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770] | ** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
{{#set: common name=lipoate-protein ligase}} | {{#set: common name=lipoate-protein ligase}} | ||
− | {{#set: gene associated=SJ11692|SJ06657 | + | {{#set: common name=lipoate-ATP adenylate transferase}} |
− | {{#set: in pathway= | + | {{#set: gene associated=SJ04393|SJ11692|SJ06657|SJ03663}} |
+ | {{#set: in pathway=PWY-6984|PWY0-522}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 14:22, 10 January 2019
Contents
Reaction RXN-8654
- direction:
- LEFT-TO-RIGHT
- common name:
- lipoate-protein ligase
- lipoate-ATP adenylate transferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 LIPOIC-ACID[c] + 1 ATP[c] => 1 LIPOYL-AMP[c] + 1 PPI[c]
- With common name(s):
- 1 H+[c] + 1 (R)-lipoate[c] + 1 ATP[c] => 1 lipoyl-adenylate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ04393
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ11692
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06657
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03663
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6984, lipoate salvage II: PWY-6984
- 2 reactions found over 4 reactions in the full pathway
- PWY0-522, lipoate salvage I: PWY0-522
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links