Difference between revisions of "RXN-12669"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase * ec numbe...") |
|||
| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6] | ** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6] | ||
| + | * common name: | ||
| + | ** acyl-CoA oxidase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 13: | Line 13: | ||
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-196]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD0-2108]][c] | ** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-196]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD0-2108]][c] | ||
* With common name(s): | * With common name(s): | ||
| − | ** 1 oxygen[c] '''+''' 1 octanoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 | + | ** 1 oxygen[c] '''+''' 1 octanoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (2E)-oct-2-enoyl-CoA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ13468]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ03090]] | * Gene: [[SJ03090]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 29: | Line 33: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathways == | == Pathways == | ||
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920] | * [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920] | ||
| Line 45: | Line 45: | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-1.3.3.6}} | {{#set: ec number=EC-1.3.3.6}} | ||
| − | {{#set: gene associated=SJ03090|SJ07451|SJ19669|SJ07452 | + | {{#set: common name=acyl-CoA oxidase}} |
| + | {{#set: gene associated=SJ13468|SJ03090|SJ07451|SJ19669|SJ07452}} | ||
{{#set: in pathway=PWY-6920}} | {{#set: in pathway=PWY-6920}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:32, 10 January 2019
Contents
Reaction RXN-12669
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- acyl-CoA oxidase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 OXYGEN-MOLECULE[c] + 1 CPD-196[c] => 1 HYDROGEN-PEROXIDE[c] + 1 CPD0-2108[c]
- With common name(s):
- 1 oxygen[c] + 1 octanoyl-CoA[c] => 1 hydrogen peroxide[c] + 1 (2E)-oct-2-enoyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13468
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03090
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07451
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ19669
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ07452
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6920, 6-gingerol analog biosynthesis (engineered): PWY-6920
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
