Difference between revisions of "RXN-5341"

Revision as of 09:23, 18 May 2018

Reaction RXN-5341

• direction:
  • LEFT-TO-RIGHT
• common name:
  • beta-glucosidase
  • linamarase (β-glucosidase)
• ec number:
  • EC-3.2.1.21
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 LINAMARIN[c] + 1 WATER[c] => 1 Glucopyranose[c] + 1 2-HYDROXY-2-METHYLPROPANENITRILE[c]
• With common name(s):
  • 1 linamarin[c] + 1 H2O[c] => 1 D-glucopyranose[c] + 1 2-hydroxy-2-methylpropanenitrile[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ18318
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ04559
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ05741
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ14973
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ05532
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ17199
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ19930
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05782
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ14193
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05257
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ05533
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ05740
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ00855
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ04558
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ18897
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ16402
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ11958
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM

Pathways

• PWY-3121, linamarin degradation: PWY-3121
  • 1 reactions found over 2 reactions in the full pathway
• PWY-7091, linustatin bioactivation: PWY-7091
  • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links