Difference between revisions of "RXN-12412"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12412 RXN-12412] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans-neurosporene desa...") |
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*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-5942]], trans-lycopene biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5942 PWY-5942] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY-6581]], spirilloxanthin and 2,2'-diketo-spirilloxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6581 PWY-6581] | * [[PWY-6581]], spirilloxanthin and 2,2'-diketo-spirilloxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6581 PWY-6581] | ||
** '''1''' reactions found over '''9''' reactions in the full pathway | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| − | |||
| − | |||
* [[PWY-7591]], okenone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7591 PWY-7591] | * [[PWY-7591]], okenone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7591 PWY-7591] | ||
** '''2''' reactions found over '''6''' reactions in the full pathway | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
| Line 32: | Line 32: | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30626 30626] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30626 30626] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04800 R04800] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=all-trans-neurosporene desaturase}} | {{#set: common name=all-trans-neurosporene desaturase}} | ||
{{#set: gene associated=SJ18358}} | {{#set: gene associated=SJ18358}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-5942|PWY-6581|PWY-7591}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 14:55, 10 January 2019
Contents
Reaction RXN-12412
- direction:
- LEFT-TO-RIGHT
- common name:
- all-trans-neurosporene desaturase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 NEUROSPORENE[c] + 1 Acceptor[c] => 1 CPD1F-114[c] + 1 Donor-H2[c]
- With common name(s):
- 1 all-trans neurosporene[c] + 1 an oxidized electron acceptor[c] => 1 all-trans-lycopene[c] + 1 a reduced electron acceptor[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ18358
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-5942, trans-lycopene biosynthesis I: PWY-5942
- 3 reactions found over 4 reactions in the full pathway
- PWY-6581, spirilloxanthin and 2,2'-diketo-spirilloxanthin biosynthesis: PWY-6581
- 1 reactions found over 9 reactions in the full pathway
- PWY-7591, okenone biosynthesis: PWY-7591
- 2 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
